Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00425 ATGGGTCGGAGGAGCAATGGACTAAACTCTGTTCTCGCTCACCGTTTGATACTCCTCTTCGTGTGTTTGGCTTCGGGCGGTTTGGTCTACGCGCTTCTCTCTGCGGTGGTCGCAAATGGCAGAAGCAGAGTTTCAGACTTTGGGAGGCTGGTTGATGAGGGTATGGCGGTGCAGAATGAGGGAGGGTGCTGTAGGGGGATTGAGAATTTGGAGCTTTGGGGTTCAGCTGTGAAGTGGGGTTCTGAGTTTAAGTTCAACAATTCTGAAGGATGCTGCAACGCGTGCAAATCAATGTGTTCAGGAAAAGATGGACCTTGTCTCTGTGATACTTGGGTCTTTTGTGGGGATCGTAAGGCCTGTGGATCCAAGTTCGGTGAGTGTTGGTTGAAGAAACAGAAGGACAGCTTGGCACCTGAACGGCAAGAAGGAGTGCCTCCAGGGGAAGTGGTTGGTTGGACTTCTGGTCTTATTTTTGGGAAAGGAGAGGGTATTATTGGACTGGAAACTGAACATGGAACTCTTCATATTAAACTTTTACCTGACTGTGCTCCACACTCCGTTGCCTACATTCTGGAATTGTTGTCTTTGCACCATTGTGCTGGCTGCCAATTTTACCGTGCAGAGAGCCGAGGTCAATCATGGGATTCAGAAGGAAACCATATAGAAAATGCTGGCTTTGGTCCACCTTATGCATTAATTCAAGGGACACTAGAAGCACAAGGCACAGCTTTCAATAAACTTCCTGTGGAAGATTGTCCAACCCTTAGAAGGGGTTCTGTTGCTTGGATTGGTTCTGGTCCTGAATTCTTCGTTAGCCTTGCTGATCATTCAGAGTGGAAACATGAATACACTGTATTTGGTTCTGTTCTTCCAGAAGACATGCATATTGCAGAGAAAATCTCTACACTCCCCACAATAGCTGATGTGTGGAACAATGTCAACGTGACGGTTTTGAAAAATCCTGTTCCTCTGTTGGTCCGTAGAATCCAGAAAAGCCACGTAGATGAAATTTGA 1014 0.4665 MGRRSNGLNSVLAHRLILLFVCLASGGLVYALLSAVVANGRSRVSDFGRLVDEGMAVQNEGGCCRGIENLELWGSAVKWGSEFKFNNSEGCCNACKSMCSGKDGPCLCDTWVFCGDRKACGSKFGECWLKKQKDSLAPERQEGVPPGEVVGWTSGLIFGKGEGIIGLETEHGTLHIKLLPDCAPHSVAYILELLSLHHCAGCQFYRAESRGQSWDSEGNHIENAGFGPPYALIQGTLEAQGTAFNKLPVEDCPTLRRGSVAWIGSGPEFFVSLADHSEWKHEYTVFGSVLPEDMHIAEKISTLPTIADVWNNVNVTVLKNPVPLLVRRIQKSHVDEI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00425 337 PANTHER EXPRESSED PROTEIN 1 333 - -
Vian10g00425 337 Gene3D - 158 322 IPR029000 -
Vian10g00425 337 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 167 313 IPR002130 GO:0000413|GO:0003755
Vian10g00425 337 FunFam Predicted protein 160 323 - -
Vian10g00425 337 SUPERFAMILY Cyclophilin-like 160 318 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00425 Vian-Chr10 3821254 3824945 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00425 - - gmx:100800178 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00425 10 3821254 3824945 Vian10g00425 10 3821254 3824945 ECH