Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00354 ATGCCAGTCAAATCAATTATGTCCAGCACTGCTCCGCTTCTCACGTCGCGCCACGTGGCAGTGATCGGTGCCGGCGCCACCGGTCTTGTGGCGGCACGCGAGCTCCGAGGTGAGGGGCACCGGGTGGTGGTTTTCGAGCGAGGAGACGAAGTTGGAGGCACGTGGGTGTATACTCCGGAAGTGGAATCAGATCCGATTGGTTTGAACCCGAAGCGGAGCATTGTCCACTCGAGTCTGTACGATTCGCTCCGAACTAATCTGCCTCGGGAGAGCATGGGTTTCCGAGATTACCCTTTCAAGAAGAGGGAGGAGAAAGGGAGGGATTCTAGAAGGTTCCCCGGACACAGAGAGGTTTTGATGTATTTGCAAGATTTCGCAGCTCGTTTTGAAATCAATGAACTGGTGCGGTTTGGGACGGAAGTGGTGTTCGCAGGATTGGATAAGGGTGGAAAGTGGAGGGTGACGTCAGCATCTCGGAATGCTGATCCTGTGGACGAGATTTACGACGCCGTTATCGTTTGCAACGGACATTATGTTAAGCCTCGTCTTCCTCATATCCCTGGTATTAACGTGTGGCCGGGAAAGCAGCTTCATAGCCATAATTATAGAAGACCTGAGCCATATCAAGATAAAGTTGTAGTTCTAATTGGTAACTCCTCGAGTGCGGTTGATATCTCTCGAGATATCGCAACGGTTGCTAAAGAAGTCCACATTGCAGCTTGGTCTCTTGAAGAAGATAAGCTAGGAAAAATGCATGGCCATGAAAACATGTGGCTTCATTCTATGGTTGACAGTGTTCATGAAGATGGTACAGTGGTTTTTAAAGATGGAAATGCAGTTGCTGCTGACTTCATCATACATTGCACAGGATATAACTATGAGTTTCCTTTTCTTGAAACCAACGGGGAGGTGACTGTTGATGACAACCGTGTAGGACCACTCTACAAGCATGTTTTTCCACCAGCCTTGGCTCCATGCCTTTCATTTGTTGGGGTGCCTTGGAAGATTGTTCCCTTCCCTATGTTCGAGTTGCAGAGCAAGTGGATAGCTGCAGTTTTGTCTAACCGCATTGCACTTCCTTCGAAGGAGGAGATGTTAGAAGATATTGAAGCTTTCTACTCATCGCTTGAAGCCTCTGGCACACCTAAGCGTTACACTCATAACATGGGCCTTCTTCAGTGGGAATACAATGATTGGATTGCGGATCAGTGTGGATTTCCTTATGTTGAAGAATGGAGAAAACAAATGTACTTGGCCACAGGTAAGAACAGGGCCTTGCGACCCGACTCTTACCGTGACGAGTGGGAGGATGATGATTTGGTTCAGCAAGCTGAACAGGATTTTGCCAATTATCTGATCTGA 1362 0.4816 MPVKSIMSSTAPLLTSRHVAVIGAGATGLVAARELRGEGHRVVVFERGDEVGGTWVYTPEVESDPIGLNPKRSIVHSSLYDSLRTNLPRESMGFRDYPFKKREEKGRDSRRFPGHREVLMYLQDFAARFEINELVRFGTEVVFAGLDKGGKWRVTSASRNADPVDEIYDAVIVCNGHYVKPRLPHIPGINVWPGKQLHSHNYRRPEPYQDKVVVLIGNSSSAVDISRDIATVAKEVHIAAWSLEEDKLGKMHGHENMWLHSMVDSVHEDGTVVFKDGNAVAADFIIHCTGYNYEFPFLETNGEVTVDDNRVGPLYKHVFPPALAPCLSFVGVPWKIVPFPMFELQSKWIAAVLSNRIALPSKEEMLEDIEAFYSSLEASGTPKRYTHNMGLLQWEYNDWIADQCGFPYVEEWRKQMYLATGKNRALRPDSYRDEWEDDDLVQQAEQDFANYLI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00354 453 Gene3D - 19 433 IPR036188 -
Vian10g00354 453 Gene3D - 185 288 IPR036188 -
Vian10g00354 453 PANTHER DIMETHYLANILINE MONOOXYGENASE 17 438 - -
Vian10g00354 453 Pfam Flavin-binding monooxygenase-like 17 240 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vian10g00354 453 Pfam Flavin-binding monooxygenase-like 259 371 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vian10g00354 453 SUPERFAMILY FAD/NAD(P)-binding domain 257 438 IPR036188 -
Vian10g00354 453 FunFam Flavin-containing monooxygenase 185 288 - -
Vian10g00354 453 SUPERFAMILY FAD/NAD(P)-binding domain 15 239 IPR036188 -
Vian10g00354 453 PRINTS Flavin-containing monooxygenase (FMO) signature 275 302 IPR000960 GO:0050660|GO:0050661
Vian10g00354 453 PRINTS Flavin-containing monooxygenase (FMO) signature 197 211 IPR000960 GO:0050660|GO:0050661
Vian10g00354 453 PRINTS Flavin-containing monooxygenase (FMO) signature 340 353 IPR000960 GO:0050660|GO:0050661
Vian10g00354 453 PRINTS Flavin-containing monooxygenase (FMO) signature 17 33 IPR000960 GO:0050660|GO:0050661
Vian10g00354 453 PRINTS Flavin-containing monooxygenase (FMO) signature 41 65 IPR000960 GO:0050660|GO:0050661
Vian10g00354 453 PRINTS Flavin-containing monooxygenase (FMO) signature 224 239 IPR000960 GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00354 Vian-Chr10 3173569 3176881 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00354 - - gmx:100793203 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00354 10 3173569 3176881 Vian10g00354 10 3173569 3176881 ECH