Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00350 ATGACAAAAATACCAAAGAATAAGACAAGTGTAAAACGAAGATGCATGAACGGGAGAGTAAAAAATGTAATATATAAGTCATTTCACTTTCTACAAGTTAACTCTGAAGAAAGAAGAAAGAGTGTTGGTTGTAGTACAGCGCCTGCCAATGCCGAATTCAGGAAATGGGGGAAAGTGGTTTCGGCCACGCTGGCGGCCGCCGTCATTGCCTTCGGCTCTGACATGTCTGCCCTTGCTGATCTCAACAAATTTGAGGCTGAAATGAGGGGTGAATTTGGAATAGGATCGGCAGCACAATTTGGCTCTGCAGATCTCAGGAAAGCAGTGCATGTGAATGAAAATTTCAGAAGAGCCAATTTCACAGCTGCTGATATGAGAGAATCTGATTTTAGCGGTTCAACTTTCAATGGTGCATACCTTGAGAAAGCTGTTGCATACAAGGCAAATTTTTCAGGGGCCGATTTAAGTGATACATTGATGGATCGCATGGTTTTAAACGAAGCCAATCTCACTAATGCCATTCTCCTTAGAACAGTCCTCACACGGAGTGACCTTGGGGGTGCCATCATCGAAGGTGCTGACTTTAGTGATGCTGTGTTGGACCTTACCCAAAAGCAGGCTTTATGCAAGTATGCCAGTGGCACAAATCCTGTTACAGGAGTGAGCACAAGAGTAAGCTTAGGTTGTGGAAACAAACGACGAAATGCTTATGGCTCCCCATCATCTCCCCTTTTAAGTGCTCCACCACAGAAACTGCTTGACCGAGATGGTTTCTGTGATGAAGCAACAGGACTTTGCGATGCAAAGTAG 810 0.4444 MTKIPKNKTSVKRRCMNGRVKNVIYKSFHFLQVNSEERRKSVGCSTAPANAEFRKWGKVVSATLAAAVIAFGSDMSALADLNKFEAEMRGEFGIGSAAQFGSADLRKAVHVNENFRRANFTAADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAILLRTVLTRSDLGGAIIEGADFSDAVLDLTQKQALCKYASGTNPVTGVSTRVSLGCGNKRRNAYGSPSSPLLSAPPQKLLDRDGFCDEATGLCDAK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00350 269 Pfam Pentapeptide repeats (8 copies) 123 159 IPR001646 -
Vian10g00350 269 Pfam Pentapeptide repeats (8 copies) 165 199 IPR001646 -
Vian10g00350 269 SUPERFAMILY Pentapeptide repeat-like 98 199 - -
Vian10g00350 269 Gene3D - 93 238 - -
Vian10g00350 269 PANTHER THYLAKOID LUMENAL PROTEIN TL20.3, CHLOROPLASTIC 59 268 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00350 - - pvu:PHAVU_002G061100g 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00350 10 3149789 3153369 Vian10g00350 10 3149789 3153369 ECH