Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00333 ATGGAATGGCCTGCGTGCACGGATGAATACGAAAAGCTTGTAATACGAATGAGCACTCCCAGGGTTGTTATTGACAATTCCGTGTTCTCTTCAGCTACTCTTGTCAAGGTTGACAGTGCTAGAAGGCATGGTATTTTATTGGATGCTGTACAAGTGCTCATCGACCTGGACCTTTCTATAAAGAAAGCCTATATTTCTGCTGATGGCAAATGGTGTATGGATGTTTTTCATGTCACTGATCAATATGGACACAAGATAACGGACGATAAGGTTTTAAAATATATTGAGCAGTCACTTGGGAGCATTCAGTATGGAAGAACCGACAGTTCCAATGGTCTCACTGCGCTGGAATTGACAGGAACTGACCGAGTTGGTCTTTTATCGGAGGTGTTTGCCGTACTGGCTGATCTTCAATGTGATGTGGTTGAGGCAAAGGTTTGGACTCACAATGGCCGTATTGCTTCCTTAATCTATGTAAAAGATTCTAGTTCTGGGTCTACTATTGAGGACTCTCAGAAAATTAAGAAGATTGAATTGCGCTTAAGAAATGTTTTGAAGGGAAATGACATTAGAAGTGCAAAAATTTCTGTTTCTATGGCTGCGATGCACACTGAAAGAAGGCTACACCAAATGATGTTTACAGACCGTGATTATGAGAGGACTCCCATTCTTGAGGTTACTTCTGATAACCCAGTAGTGACGGTTCAGAATTGGGCAGGAAGAGGCTATTCAGTCGTGAATGTTCAGTGCAAAGATCGAACCAAGCTTTTATTCGATGTTGTATGCAATTTGACAGACATGGAATACGATGTTTTTCATGCAACTATTAACACAAATGATGACAGAGCATACTTGGAGTTTTATATAAGACACAAGGATGGCACTCCAATTAGCTCAGAACCAGAGAGACAACGTGTAATTCAATGCCTAAAAGCTGCTGTAGAGAGAAGGGCATCTGAGGGTGTTCGGCTAGAGTTATGTAAAGAAGACAGGCAGGGGCTTCTGGCAGAAGTAATGAGAACTTTCCGCGAGAATGGGCTCAATGTGACCAGGGCTGAGATATCCACTGTAGGGAATATGGCTACAAATGTATTCTATGTAACGGACGCCATTGGAAATCCAGCTGAGTCAAAAATTATTGAATGTGTTAGGCAGAAAATTGGGTTAAGATATTTAGAAGTGAAGGAATTGCCGTTGGTAAATAATCAGGAAATGCAGAGAGAGGATCAAGCGGTTGGAATTGGTGGGGCAGTGTTGTTTTCCATAGGGAGTCTGGTGAAAAGAAATCTGTTTAGTTTGGGATTAATCAAATCCTGTTCCTGA 1323 0.4165 MEWPACTDEYEKLVIRMSTPRVVIDNSVFSSATLVKVDSARRHGILLDAVQVLIDLDLSIKKAYISADGKWCMDVFHVTDQYGHKITDDKVLKYIEQSLGSIQYGRTDSSNGLTALELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDSSSGSTIEDSQKIKKIELRLRNVLKGNDIRSAKISVSMAAMHTERRLHQMMFTDRDYERTPILEVTSDNPVVTVQNWAGRGYSVVNVQCKDRTKLLFDVVCNLTDMEYDVFHATINTNDDRAYLEFYIRHKDGTPISSEPERQRVIQCLKAAVERRASEGVRLELCKEDRQGLLAEVMRTFRENGLNVTRAEISTVGNMATNVFYVTDAIGNPAESKIIECVRQKIGLRYLEVKELPLVNNQEMQREDQAVGIGGAVLFSIGSLVKRNLFSLGLIKSCS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00333 440 CDD ACT_ACR_4 321 392 - -
Vian10g00333 440 SUPERFAMILY ACT-like 30 97 IPR045865 -
Vian10g00333 440 CDD ACT_ACR_2 114 187 - -
Vian10g00333 440 SUPERFAMILY ACT-like 110 172 IPR045865 -
Vian10g00333 440 Pfam ACT domain 116 168 IPR002912 -
Vian10g00333 440 Gene3D - 113 195 - -
Vian10g00333 440 ProSiteProfiles ACT domain profile. 115 192 IPR002912 -
Vian10g00333 440 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 396 IPR040217 -
Vian10g00333 440 CDD ACT_ACR_3 243 317 - -
Vian10g00333 440 SUPERFAMILY ACT-like 243 311 IPR045865 -
Vian10g00333 440 SUPERFAMILY ACT-like 319 383 IPR045865 -
Vian10g00333 440 ProSiteProfiles ACT domain profile. 323 402 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00333 Vian-Chr10 3027735 3030189 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00333 - - gmx:100780903 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00333 10 3027735 3030189 Vian10g00333 10 3027735 3030189 ECH