Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00322 ATGATGATGATGATGGTGCAGGAGGAAGAGATGGAGATAGAAGATTCACAGGTGTTTGTTGCTCATGAGATTGATTTGGATTATGAGTTCGACGCAGTTCGATTCTTCGATTTCAGTGTGCAAGAAACTCCTGATCAAGCTCGCCAAGCTCAACTCTGGTTTCAATCCGCCGTCAGCTACCCTCCTTCCCCTTTTGTGGTGAAGCTAGTGGTGAGAGAGGACGAATCAGAGGGTCGGGAATGCGCAACCACCGTTCACGGTGCCAAGCCTAACAATGTTCCGTCGGGGATTGGATTTTCGCGCTCCGTTTTTCACTATGACGGTGGTTCAAAAGGAGGGGATGATAGCGGGAACATCTCTGCCTTGCTGAGTGGAGTTCCACGGGATGTTAACGGGAAACTGTTACAAGTAACTCCAGGACTGACCTTTAGTAGCAAGACAATCAATGGCAATTTGAGTTCAAAAGTTAAACCTGCTGCCATGAAGGGTTCAACACTAATGAAACCTACTGCTAGTCAGTTGGCTAAGCAAAATCGGCCCCATCAAATTGTTAGCTCAAGGTTTCAGAAAGTACAAGATGGCAACAAAAAAATGAATTTGTCTACGTCTTTTGGCATAGAGTGTCAAGCTGCCAAACGACAGAAATTAGAAGGTGGCAGCTTGCACAAGGTTGGTGATGTGAAGCAGCAAGTTAATTTTGTCCACAAGGCACCTAAGAAGGTTGCAAGTGTTGATCAAAATTGTGGACATTCCAAGCTGAAGATTACAATTCCTAGAGAGCCTGACTTAGAAACAGCTCACAGAGCACAAAGGATTAGACCTAAAAATGCTGCAGAGGCAGAAGTTGTGACAGTGGCAGCCCCCAGATTCAAAGCCCGGCCATTAAACAGAAAAATTCTAAATGCTCCTTCGTTACCATTTTCCAAGAGGAGCACACCCCGATTGCCTGAATTTCAAGAATTTCATCTCAAGACACAGGAGAGGGCCATGCAGCATACATCCGCGTCTTCATCATCTTCACTTCATTGCAATGATTCAAATAAGGATTTGGACAAACCTACCACTGTTTCTGCTCAAGAAAATAGAATCGGGGATTTGAGAAGGCCATCTGGCATGGGTGTTCCAAAGCATGATGGGTTGGATTTTGCATATTGTTTTAAAGCTCGGCCTCTTAATAAGAAGATTCTTTCAAGTAAAGGAGATATTGGTGTTTTCCGGAACAGAAAGCAGGAAACCACTGTGCCAATGGAATTTAACTTCCATACGGAAAAGAGGATTCAGCATAACCCACCAATTGAACTCTTTAGCAAGATGTCCCTAACATCAGAAGTCCAGTCAAATAATGGATCTCACTTGAAGCTGCCTCGGCATTCTAAAGTGTTTAGAGAGGATTCAAAAGAAAATATAGGGAGTTCTTTTCATGGGAATGCAAAGGAAACGCCTTTCATATTTGGAGGAAAGCAAATTCACAGTAGGAGAGAAGGCTGCGACCCTGAAGCCGGTACTCTGTTAACTGCGAGGAGGAGCTTGGGTATTCGATGA 1542 0.4423 MMMMMVQEEEMEIEDSQVFVAHEIDLDYEFDAVRFFDFSVQETPDQARQAQLWFQSAVSYPPSPFVVKLVVREDESEGRECATTVHGAKPNNVPSGIGFSRSVFHYDGGSKGGDDSGNISALLSGVPRDVNGKLLQVTPGLTFSSKTINGNLSSKVKPAAMKGSTLMKPTASQLAKQNRPHQIVSSRFQKVQDGNKKMNLSTSFGIECQAAKRQKLEGGSLHKVGDVKQQVNFVHKAPKKVASVDQNCGHSKLKITIPREPDLETAHRAQRIRPKNAAEAEVVTVAAPRFKARPLNRKILNAPSLPFSKRSTPRLPEFQEFHLKTQERAMQHTSASSSSSLHCNDSNKDLDKPTTVSAQENRIGDLRRPSGMGVPKHDGLDFAYCFKARPLNKKILSSKGDIGVFRNRKQETTVPMEFNFHTEKRIQHNPPIELFSKMSLTSEVQSNNGSHLKLPRHSKVFREDSKENIGSSFHGNAKETPFIFGGKQIHSRREGCDPEAGTLLTARRSLGIR 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00322 513 PANTHER TARGETING PROTEIN FOR XKLP2 20 469 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Vian10g00322 513 MobiDBLite consensus disorder prediction 328 361 - -
Vian10g00322 513 Pfam Cell cycle regulated microtubule associated protein 253 420 IPR027330 -
Vian10g00322 513 MobiDBLite consensus disorder prediction 327 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00322 Vian-Chr10 2925818 2931820 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00322 - - gmx:100806215 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00322 10 2925818 2931820 Vian10g00322 10 2925818 2931820 ECH