Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00319 ATGTCTTCTGATAGCGCAAAGGAAAATGTGTCGGTAGTTGATTCATCGGTCACTGAATGGAGGAATGACATTGGAAATTCAGATGATCCAGAGAGCTCCTCTTACAAGTGTAATGAAAACAATAATCCAATTCGGACAGATATAGCGGAACACTCTTATGGTCTGATAGGGCATCCAACAGGAATTGGAGTGGAAAAGTGGAATGATATTAAGTATTTCATCATTAAGAGTTTGAACCGTCAAAATATTGATTTGTCTATTAAGAAAGGAATTTGGGCTACTCAAATTATGAATGAACGGATTCTAGACGAAGCTTTTCATAACTCGGGCTGTGTAATCCTTATATTTAGTGTCAACACGAGTGGTTCCTTCCAAGGATACGCACAAATGATGTCCTCCATTGGAAGGGGTAGAGACAATGTTTGGAGTGAGGGAATCGGTAAAAGTAATCCTTGGGGCCGCAGTTTTAAGGTCCAGTGGCTGCGTTTCAATGATTTGCCTTTCCACAAAACTCTACATCTCAAGAATCCGTTGAATGACTATAAGCCTGTCAAAATTAGCAGAGACTGTCAGGAGTTATCTCCAGACATTGGCCTAGCTCTTTGTGAACTTCTTGATGGTAAGAATGATACCAATGACCTACTGACCAGTTCCTTAAGGGGTGATTTTTCATTTAAGGGTCGCTATGTGAGTACTCCAAGTTCAATGGGAGACGAAGACTATAAATTTCGTCCACTTCATATGTCATGGTCAATGCCCCTGGCTTATCCTTCCCTGTTTTACCAAAATCAACCCGTAATAAATGAATTTCGTTCAACAAAGCAGAGATTCAGTGGGACAATGCTTACTGAAACACTGCCTATCTCTTCTTCTGCATCGCCACAACTGTCAGGGATTAAACGTGCTCATTATAGTGGACATATTCCAGAGCTACAAACAAAGAAGGACGTGTCTTCTCAATTAGATTTTTGGGGTGTGTCTACAGGCTGCCCTTTAGCCGGTAGTACCCTAACTGAGGATGATTTTCTTGACATGTCCTATGAAGAATACCTGGAGGAGGTCCATAGCAGAGGCAAGAAACAGTTACGCACCAGTTCACAGGAAACCATAACCAAGGCATCAAAATTCTCAGGCAACTAA 1140 0.414 MSSDSAKENVSVVDSSVTEWRNDIGNSDDPESSSYKCNENNNPIRTDIAEHSYGLIGHPTGIGVEKWNDIKYFIIKSLNRQNIDLSIKKGIWATQIMNERILDEAFHNSGCVILIFSVNTSGSFQGYAQMMSSIGRGRDNVWSEGIGKSNPWGRSFKVQWLRFNDLPFHKTLHLKNPLNDYKPVKISRDCQELSPDIGLALCELLDGKNDTNDLLTSSLRGDFSFKGRYVSTPSSMGDEDYKFRPLHMSWSMPLAYPSLFYQNQPVINEFRSTKQRFSGTMLTETLPISSSASPQLSGIKRAHYSGHIPELQTKKDVSSQLDFWGVSTGCPLAGSTLTEDDFLDMSYEEYLEEVHSRGKKQLRTSSQETITKASKFSGN 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00319 379 ProSiteProfiles YTH domain profile. 70 205 IPR007275 GO:0003723
Vian10g00319 379 MobiDBLite consensus disorder prediction 363 379 - -
Vian10g00319 379 Pfam YT521-B-like domain 71 205 IPR007275 GO:0003723
Vian10g00319 379 MobiDBLite consensus disorder prediction 358 379 - -
Vian10g00319 379 CDD YTH 71 205 IPR007275 GO:0003723
Vian10g00319 379 Gene3D ph1033 like domains 63 218 - -
Vian10g00319 379 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 66 217 IPR045168 -
Vian10g00319 379 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00319 Vian-Chr10 2910422 2913014 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00319 K20100 - gmx:100784130 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00319 10 2910422 2913014 Vian10g00319 10 2910422 2913014 ECH