Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00314 ATGGGTACTCTCACTACTCTTCATCTTCTCCCTTCCAAGCTTAATAACCCTTCGCTTCCTCCACGCCACAGTATTTCTGTCTCGCCCTACGGAACACCGCACCGCAAGAAGAACAAAGCAATGGTTCCTATGGCTAGGTTGTTTGGGCCTGCCATATTTGAAGCCTCGAAGCTGAAGGTTTTGTTCTTGGGGGTGGATGAAAATAAACACCCGGGAAATCTTCCTAGGACTTATACGCTAACCCATAGCGATATAACCGCTAAGCTCACCCTGGCAATCTCTCAAACCATAAATAACTCTCAGTTGCAGGGATGGTACAACAGATTGCAAAGGGACGAAGTGGTGGCCCAGTGGAAGAAGGTGAAGGGAAGGATGTCCCTGCACGTTCACTGCCACATCAGTGGAGGTCATTTTCTGTTGGACATGTTAGCGAGGTTAAGATACTTCATCTTCTGCAAGGAGCTACCAGTGGTGTTGAAGGCAGTGGTTCACGGCGATGGTGATCTTTTCAACAACTACCCGGAATTGCAAGAGGCCTTGGTTTGGGTATATTTTCACTCCAACATTCCAGAATTCAACAAGGTGGAATGCTGGGGCCCACTGAGGGATGCATACGGTGGGGCCCCGGAAGAGATGGCGGAGGAAGAAAGTGTTGGAAGCAAGGAGGGGTTGGCGATTCCTCAGCCATGCCAAGAAGAATGCGAATGTTGCTTTCCCCCAATGACGTTGAACCCAATTCAGTGGTCTAAAGAAGTTCCCAATCGCCATTACGAACCTTGTGATGGGATTGAGCCACAACAAAATCTATAA 810 0.4864 MGTLTTLHLLPSKLNNPSLPPRHSISVSPYGTPHRKKNKAMVPMARLFGPAIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQGWYNRLQRDEVVAQWKKVKGRMSLHVHCHISGGHFLLDMLARLRYFIFCKELPVVLKAVVHGDGDLFNNYPELQEALVWVYFHSNIPEFNKVECWGPLRDAYGGAPEEMAEEESVGSKEGLAIPQPCQEECECCFPPMTLNPIQWSKEVPNRHYEPCDGIEPQQNL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00314 269 MobiDBLite consensus disorder prediction 12 36 - -
Vian10g00314 269 Pfam Staygreen protein 53 204 IPR024438 -
Vian10g00314 269 PANTHER PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED 33 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00314 Vian-Chr10 2886160 2887632 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00314 K22013 - gmx:732541 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00314 10 2886160 2887632 Vian10g00314 10 2886160 2887632 ECH