Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00313 ATGGCATCGTCGTCTTCGCCTACGGACCAACAACAACTCAGAGACGAAGATCGTGAAGAGGACCATCCTCCGCCGCACTCAGTCAAAGACTGCATTCACAAAACCAAAACGATTCAGTTTCTCGGACGCACCACTCCGATCGTTCTCCAAAACGACAATGGACCGTGCCCGCTCCTCGCTATCTGTAATGTTCTTCTGCTAAGAAACAATTTAAATTTGAGTCCAGATATTTCTGAAGTCTCACAGGAGAAATTACTTTCATTGGTCGCTGAACGATTAATTGATTCAAATAGTAATGTGAATAACAAAGATGCAGGCTATGTTGAAAATCAACAACAGAACATTGCTGATGCAATTGATTTGCTTCCTAGGCTTGCTACTGGCATTGATGTAAATATAAAATTTAGAAGAATTGCTGATTTTGAATTCACTCGAGAGTGTGCTATATTTGATCTGTTGGACATCCCTTTGTATCACGGCTGGATTGTCGATCCTCAGGATTATGACACTGCAAATGCAATTGGATCAAAGTCCTATAATGCTCTTATGGGAGAGCTTGTCTCTCTTGAAACACTAAACATGGATGTCCATCATAAAAATGTTGCAGAAGAAGATTGTGTTGACTTTGTGGCTGCAACAACTGCTACGCTTGGAGTTCCTTCTCCCAGTCTTTCAAAAACCAGGTCTTTTGAAGATTCTTCTCAATCTATTTCTGATCAGATACCAAGAAAAGGTGATCTTGAAGAAGAGGCAGAGTTGTTGAGAATCTTGAAACTGTCCGAGGCTGATTCTAAAGCTTCAATAAGTGATCCTGTTACAGTTCACGTTAACGGAGGAGAAATTTCTGCCAGTATGGAAGGAAATATGAGTAATGAACAGGTTGTAAATATGGATTCTGGAGATAAACTTGGAAGTAGCGCAGGTGCTGGTAACAGTCACTTTCATGATTCAGAGCCTTCTGTGTCTGACGACTTCACTGCTTCTGACAAAGACCTCAACAGACCGATATCTTCTACTTCTACACTGGGAGACGCAGCTAATTCATCCTTAAAAACTGATACTGTAAGCGACCTTCATCAATCGACTTATGCGGGAACCAAAGAATCTTCTGACCAAAATGATGTGATAGAGAAGAACAACCTTGATGCATTGGTTCAGAATGAGAGTGAAATTATTCCTTCTCCCAGAGAATACTCTGTCTCAGACGTTTCTGGAGATGGAAAAATCCATGACCAGTCCACTCCTGCAACTATAGATCATGAAGTTGTAGGTGAATCTCATGGACCTGATGCAACAAAATCATTGTACTCGTCCCCAGGCCATGCAGACTCAGACTCATGTAGCATCAGTTATCAGCAAACTGATGTTTCTGGAGCTTTGACTTCAACTGTTCATGGGAGTGAGCCCATATACGAGGGAGAGGAATGTGTGTTGGACACAAGAACTTTTGAGAATCGTGAACCTGTTTATGAAGGTGAGGTCGTACTTGCAGAACAGGCTGACAAAAGCACCTTAGCTTCTCCTGATATTAGAGCTAAGGATGAACTAATTCCAGAGCAAGGTGAATTGATCAAAAGTTTCTTGAGGAATAATGCCAGCCAGTTGACATTTTATGGTCTTTTCTGTTTACAAGATGGGCTTAAAGAGCGTGAGCTCTGTGTTTTCTTCCGTAACAATCATTTCAGCACTATGTTCAAGTATGAGGGTGAACTCTATCTTCTAGCCACTGATCAAGGTTACATTAATCAGCCAGATCTGGTCTGGGAAAAACTGAATGAGGTCAACGGTGATTCATTGTTTATGACCAGTAATTTCAAGGAATTCAAGGTAGAAAATCATGAAAATAGCACATGGGATGAAAGCAATGCCCTGACCAGCACTGCTGATTATCTTGCCAGCATCGATAGTGCAACACAGGCAGGCTTAGATATCAATTCTGATCTGCAATTAGCAATAGCCTTGCAACAGCAGGAATTTGAGCAGCAGCCATCACGCCAGAATAATTTACAACAATCATCCAATAGTGGTAACTCTAGATTGGTCACAGGACCCCAGGTTGCAAGAAACACTGGAAGACAGGCTTCGTCTGCATCTACATCTCCCAGGCCTGATGGAAAATCCAAAGAAAAATGTATAGTGATGTGA 2145 0.4168 MASSSSPTDQQQLRDEDREEDHPPPHSVKDCIHKTKTIQFLGRTTPIVLQNDNGPCPLLAICNVLLLRNNLNLSPDISEVSQEKLLSLVAERLIDSNSNVNNKDAGYVENQQQNIADAIDLLPRLATGIDVNIKFRRIADFEFTRECAIFDLLDIPLYHGWIVDPQDYDTANAIGSKSYNALMGELVSLETLNMDVHHKNVAEEDCVDFVAATTATLGVPSPSLSKTRSFEDSSQSISDQIPRKGDLEEEAELLRILKLSEADSKASISDPVTVHVNGGEISASMEGNMSNEQVVNMDSGDKLGSSAGAGNSHFHDSEPSVSDDFTASDKDLNRPISSTSTLGDAANSSLKTDTVSDLHQSTYAGTKESSDQNDVIEKNNLDALVQNESEIIPSPREYSVSDVSGDGKIHDQSTPATIDHEVVGESHGPDATKSLYSSPGHADSDSCSISYQQTDVSGALTSTVHGSEPIYEGEECVLDTRTFENREPVYEGEVVLAEQADKSTLASPDIRAKDELIPEQGELIKSFLRNNASQLTFYGLFCLQDGLKERELCVFFRNNHFSTMFKYEGELYLLATDQGYINQPDLVWEKLNEVNGDSLFMTSNFKEFKVENHENSTWDESNALTSTADYLASIDSATQAGLDINSDLQLAIALQQQEFEQQPSRQNNLQQSSNSGNSRLVTGPQVARNTGRQASSASTSPRPDGKSKEKCIVM 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00313 714 MobiDBLite consensus disorder prediction 11 30 - -
Vian10g00313 714 MobiDBLite consensus disorder prediction 659 714 - -
Vian10g00313 714 MobiDBLite consensus disorder prediction 222 241 - -
Vian10g00313 714 MobiDBLite consensus disorder prediction 391 448 - -
Vian10g00313 714 MobiDBLite consensus disorder prediction 659 702 - -
Vian10g00313 714 MobiDBLite consensus disorder prediction 295 354 - -
Vian10g00313 714 PANTHER NF-E2 INDUCIBLE PROTEIN 11 710 IPR007518 GO:0004843|GO:1990380
Vian10g00313 714 MobiDBLite consensus disorder prediction 1 30 - -
Vian10g00313 714 MobiDBLite consensus disorder prediction 222 244 - -
Vian10g00313 714 MobiDBLite consensus disorder prediction 331 354 - -
Vian10g00313 714 Pfam MINDY deubiquitinase 62 186 IPR033979 GO:0004843|GO:1990380
Vian10g00313 714 MobiDBLite consensus disorder prediction 431 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00313 Vian-Chr10 2869306 2875426 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00313 K01309 - gmx:100808340 1122.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00313 10 2869306 2875426 Vian10g00313 10 2869306 2875426 ECH