Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00308 ATGATGAAAGGTTCAAAGCGTTTGGCTGTGTCAGAGCCCAACCAGGTCGAGAGTAACGAAGCACCGATGCAGTTCCGGAATAAAAGAATAATGGAAGGATCCCTCTTTGATGTTCATAGGGCTGAACCATCTCAACAACCAACGGTGACAGCACCACCATTGGATATGAAACGGGCAGAGTCATCACAGCAGCATGTGAGAGCTTTAAATACCCAATTTGCAAGTTGGGTTCAAACGCAACTAAAGAATCATCCGGATGAGCTTTGGGAAGACGGTGTGAGAGATTACTTAAATCATGCTTCAAGCATTATGGAAAAGTTCAGTGATGTTGTCAACTGGCTCAAAGCAAATGCATCCAAGCCAGAAAATTCAGTTGCTGATGCTGGTGCTGCTTTTTCTGCGAAAAAACTCTTGCCTGAAGTAGTAAACAAAGAAAATAAATCTTTTGGAGAAAAAACTGGGTTTACTCCTGTTACAACTCCTACAAGTTTTTCTAGTTCATGGAGTCCTGGATTATTTTCAAGCAGTCAAAGCATTTTTGGATTTGGTAACCAAAGTTCAGCTCCCTCTAACCACAAGGCTTCAGTTGACGTAGATGAAGAAAATGAATTGGAGCAGCCTAGCAGCCCATCAGTTAAGAAGACAGAAGAGAAAGGTGTAGCTGTTGTACATGAAGTAAAGTGCAAGCTTTATGTGAAGTCGAGTGATCCAGCAGATAAAGATGTATGGAAAGATAAAGGAATGGGTCAACTGTCTATTAAATGCCAAGAAGGTGTCAGCAAGGCTACCAAAGAATCAAAACCTACAATTATTGTTCGAAATGAGGTAGGAAAAATTCTTCTCAATGCCTTGTTGTATCCAGGAATCAAGACGAACCCGCAGAAGAACTCTCTTGTTGCAATATTCCATACTACGGGTAATGCTGACGGAAGTGGGGATAACGATAGTGTAGTTGCACGCACATTCTTGATCCGAATGAAAACAGAAGATGATCGAAATAAGCTGGCTTCAACAATCCAAGAATATGCTCCAGTATCTTGA 1041 0.414 MMKGSKRLAVSEPNQVESNEAPMQFRNKRIMEGSLFDVHRAEPSQQPTVTAPPLDMKRAESSQQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYLNHASSIMEKFSDVVNWLKANASKPENSVADAGAAFSAKKLLPEVVNKENKSFGEKTGFTPVTTPTSFSSSWSPGLFSSSQSIFGFGNQSSAPSNHKASVDVDEENELEQPSSPSVKKTEEKGVAVVHEVKCKLYVKSSDPADKDVWKDKGMGQLSIKCQEGVSKATKESKPTIIVRNEVGKILLNALLYPGIKTNPQKNSLVAIFHTTGNADGSGDNDSVVARTFLIRMKTEDDRNKLASTIQEYAPVS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00308 346 SUPERFAMILY PH domain-like 213 343 - -
Vian10g00308 346 ProSiteProfiles Ran binding domain type 1 profile. 214 341 IPR000156 GO:0046907
Vian10g00308 346 SMART ranbd_3 204 342 IPR000156 GO:0046907
Vian10g00308 346 MobiDBLite consensus disorder prediction 184 217 - -
Vian10g00308 346 Pfam RanBP1 domain 212 341 IPR000156 GO:0046907
Vian10g00308 346 CDD RanBD_NUP50 215 343 - -
Vian10g00308 346 Gene3D - 140 345 IPR011993 -
Vian10g00308 346 PANTHER RAN BINDING PROTEIN 21 343 IPR045255 -
Vian10g00308 346 FunFam AT4g11790/T5C23_220 115 345 - -
Vian10g00308 346 MobiDBLite consensus disorder prediction 194 217 - -
Vian10g00308 346 MobiDBLite consensus disorder prediction 1 24 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00308 K14295 - gmx:100816975 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00308 10 2794359 2805002 Vian10g00308 10 2794359 2805002 ECH