Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00252 ATGGCTGTGCTACCTTTCCCATACTCAGCATCTCCCACTCCATCTCTCCACTTGTCTCAACAAAAAGGCCTTAAAACAAAACTAAATTCCAAAACAAGCGCGTTCTCACCAATCCAATGCTGTCACAGCCAGACAGAGCCATTCCTACTGAATGGCCTGGCCAGAGTTTCGGAGAAGATTCCTCTGAGCAACCCTTCTGTTGCAGCTTCCGGCGTGGCTGTTCCACCCAGGCCTCGAAGGATAATCCTTGTTAGGCATGGAGAGAGTGAAGGAAACGTGGATGAGAGCGTCTACACAAGGATACCTGATCCCAAGATATCGCTCACCGAGAAAGGGAGGGCACAAGCCGAGGCATGTGGGAACAGGATAAAACAAATGATTGAGAAAGAACACGGACAGCACTGGCAGGTTTACTTCTACGTGTCGCCATATCGAAGGACCCTTCAAACCTTGCAACACCTCGCTCGTCCCTTTGAACGTTCCAGAATCGCTGGTTTCAGGGAAGAACCTCGCATTCGGGAACAGGATTTTGGGAATTTTCAAAACAGAGAAAAGATGCGAGTGGAAAAGGCACTTCGGCAGCTTTATGGCCGTTTCTTTTACCGATTTCCAGATGGAGAATCCGCGGCTGATGTGTATGATAGAATCACTGGATTTAGAGAGACGTTGAGAACAGATATTAATATTGGACGGTATCAGCCACCCGAGGAGAGGAAATCAGAGATGAACTTGGTGATCGTGTCTCACGGCCTAACACTTCGAGTGTTTCTCATGAGGTGGTACAAGTGGACGGTTCAACAGTTCGAGGGTCTCAACAACTTGGGCAATGGAAATATGCTTGTCATGGAAAAGGGTCATGGAGGAAGATATAGCTTACTGATGCATCATGATGAAGAGGAGCTGAGGCGGTTTGGACTGACTGATGAAATGTTGATTGATCAGGAGTGGCATAAAATTGCAAGACCTGCTGATCTGAATTACGATTGTCCAATGGTCAATTCCTTCTTTCCCCACCTCGGTGAAGAAACATGCTAG 1035 0.4744 MAVLPFPYSASPTPSLHLSQQKGLKTKLNSKTSAFSPIQCCHSQTEPFLLNGLARVSEKIPLSNPSVAASGVAVPPRPRRIILVRHGESEGNVDESVYTRIPDPKISLTEKGRAQAEACGNRIKQMIEKEHGQHWQVYFYVSPYRRTLQTLQHLARPFERSRIAGFREEPRIREQDFGNFQNREKMRVEKALRQLYGRFFYRFPDGESAADVYDRITGFRETLRTDINIGRYQPPEERKSEMNLVIVSHGLTLRVFLMRWYKWTVQQFEGLNNLGNGNMLVMEKGHGGRYSLLMHHDEEELRRFGLTDEMLIDQEWHKIARPADLNYDCPMVNSFFPHLGEETC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00252 344 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 83 92 IPR001345 GO:0003824
Vian10g00252 344 SMART PGAM_5 80 256 IPR013078 -
Vian10g00252 344 Pfam Histidine phosphatase superfamily (branch 1) 81 289 IPR013078 -
Vian10g00252 344 Gene3D - 77 313 IPR029033 -
Vian10g00252 344 PANTHER BROAD-RANGE ACID PHOSPHATASE DET1 76 339 - -
Vian10g00252 344 CDD HP_PGM_like 80 293 IPR013078 -
Vian10g00252 344 SUPERFAMILY Phosphoglycerate mutase-like 78 297 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00252 Vian-Chr10 2184869 2186253 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00252 - - gmx:100800012 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00252 10 2184869 2186253 Vian10g00252 10 2184869 2186253 ECH