Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00233 ATGAGGGTGTTTCCTAGATTCAGATCCCTGTCGAGAGCAGTTCATCAGGAACAAGAACAAGAGCATGACGAGGAGAAAAACAACGCAGAACAGTTGAGTACGTCCCTGACAGTTTGGAGAAAATCCTTGGTGATGAGTTGCAAAGGATTCACAGTCATCGATTGTTGTGGGAATTTGGTGTATCGGGTCGACAATTATATTGGTCGACCCAACGAAGTCACTCTCATGGATGCCTCGGGAAAATCTATCCTCACCATGTTCCGCCGCAGGAGGCTTGGATTGTTGGAAGAATGGTTTGTGTATGAAGGGGAAGTGGGGAACATTAGAAGGAGAAGTAAATTGTCTGAGCCATCAAAGAGTCCAATTTGTTGTGTAAGGAAGCATGTCAATATTTTACATGGAAACTCCAATGTTCTGGCCTACGTGTTCCGTGGAGTCTCACATTCAGATAAACGGTGTGTGGCGTTCACTGTAGAAGGTTCCTACGCAAATCGTACGTGTAAGGTGTTGGATGAGTGTAGAAGGGTCGTGGCTGAAATTAAGAGGAAGGAAGCTAACACCAAAAACGTCTCTTTTGGGATAGAGATTTTTCAGTTGGTTGTGCATTCTGGCATTGATCCAGCCTTTGCCATGGCACTCGTCTTACTCCTCGATCAAATGTTTTCGTGA 669 0.4499 MRVFPRFRSLSRAVHQEQEQEHDEEKNNAEQLSTSLTVWRKSLVMSCKGFTVIDCCGNLVYRVDNYIGRPNEVTLMDASGKSILTMFRRRRLGLLEEWFVYEGEVGNIRRRSKLSEPSKSPICCVRKHVNILHGNSNVLAYVFRGVSHSDKRCVAFTVEGSYANRTCKVLDECRRVVAEIKRKEANTKNVSFGIEIFQLVVHSGIDPAFAMALVLLLDQMFS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00233 222 Pfam LURP-one-related 30 215 IPR007612 -
Vian10g00233 222 Gene3D - 28 222 IPR038595 -
Vian10g00233 222 PANTHER - 34 221 IPR007612 -
Vian10g00233 222 Coils Coil 12 35 - -
Vian10g00233 222 SUPERFAMILY Tubby C-terminal domain-like 33 221 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00233 Vian-Chr10 2048702 2049484 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00233 - - gmx:100779188 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00233 10 2048702 2049484 Vian10g00233 10 2048702 2049484 ECH
Vian10g00233 10 2048702 2049484 Vian1g03867 1 61795476 61796594 PCT