Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00225 ATGGACCAAAAAATGGAGAGCGTTGAGATCAACATTCCAACAAGTACACCTACTAAACCTGAGCTGCATGCCAAAAGAATTTGGCTTCAGATTCTGAGTGTGTGGAAATTTTGCAAGGAAGACACCGGCAGAGAAATATTTGCACTAAAAGTTGGGGTAACTGTTCTTCTTGTGTCTTTGTTCGTATTATTTGAAGCCCCATATCAAGTCTTCGGGTCGAATATGATATGGGCTGTTCTCACTGCTATCCTTGTCTTCGAGGACACTGTTGGAGCAACATTTAATCGAGGATTTAATCGAGCAGTAGGAACCTTGGTGGCTGTATTCTTGGCTGTTGTGGTTGCTGAGACAGCACTGTCGTGTGGTCATGTCGCTGAGCCTATTATCCTTGGCCTTAGCATGTTCATGATCGCGGTGATAACATCGTACATGAAAATGTGGGCACCACTTGTGCAGTATGAGTACGGGTTTAGGGTGACACTGTTGACCTATTGCTTGATCGTAGTCTCTGATTATAGAATTGGTAACCCAGTTAGGATTATGATCGATCGCCTGTACTCAATCGCCATTGGAGGAACGATATCTGTGTTGGTCAATGTCTGTATTTTCCCTATATGGGCTGGGGACCAACTGCATAAAGAGTTGGTCAAAAACTTCCATTCAGTAGCAGATTCTCTTGAGGAATGTACCAAGAAATATTTAGAAGACGCCTCGGAGAAGTCAAAAATCCCCATGGGAAGCATAGGTACATTTCCTGATGAACCAGCTTATATGAGATGCCAAAGCACCTTGGATTTAGGGTCAAAGTTTGAAACTCTGGCTCAATCGGCAAAATGGGAGCCACCGCATGGTAGATTCATGCACGTTTCATATCCATGGTTACAATATGTGAAAGTTGGAGCAGTTCTGCGACACTGTGCCTACGAGGTTATGGCACTCCATAGCATTGCACACGCCAAAATTCAGGTACCCTACAAATGGAGGGTTGGGCTTGAATCAGAAGTTGAAGAAGCATCAAAGGAAGCAGCAGAAGTAGTAAGAATTTTGGGAAGAGACATTAGCCGCATGCAGTGGAGTCTGAAAGATTCCCACATTAAAAGACTTCAAAACTGTGTCAAGAGATTGCAGAGTTGTATGTGCTTCCAATATTCTTATATGCTGGCATCAACTTTTGATAACCCTTTAAAGACCTCTGCAAACATTTCACACATGTTCTACCATTTACCATATCAGAGGGAGATGATGGAAGAAGAAGTGGAATATTACAATGAGATAACAGGGAAGCAATTGCGAAGGCTATATTCTTGGCCACCGAGAGAAGCAGATGCTTTTGAAGAAGACAGTGAGAATAACGTAAAGTTGAGAGCCTTGGAAAGTGCAGCAATGTTGTCATTCACTAACTTTGCTTCCTCTCTGATGGAGTTTGTGGCAAGAGTTGAGCATTTGGTAGAGGCTGTTCATGAGTTATCCAAGATGGCCAAATTCAAGTCTGCATTGTTAAGTTAG 1506 0.4283 MDQKMESVEINIPTSTPTKPELHAKRIWLQILSVWKFCKEDTGREIFALKVGVTVLLVSLFVLFEAPYQVFGSNMIWAVLTAILVFEDTVGATFNRGFNRAVGTLVAVFLAVVVAETALSCGHVAEPIILGLSMFMIAVITSYMKMWAPLVQYEYGFRVTLLTYCLIVVSDYRIGNPVRIMIDRLYSIAIGGTISVLVNVCIFPIWAGDQLHKELVKNFHSVADSLEECTKKYLEDASEKSKIPMGSIGTFPDEPAYMRCQSTLDLGSKFETLAQSAKWEPPHGRFMHVSYPWLQYVKVGAVLRHCAYEVMALHSIAHAKIQVPYKWRVGLESEVEEASKEAAEVVRILGRDISRMQWSLKDSHIKRLQNCVKRLQSCMCFQYSYMLASTFDNPLKTSANISHMFYHLPYQREMMEEEVEYYNEITGKQLRRLYSWPPREADAFEEDSENNVKLRALESAAMLSFTNFASSLMEFVARVEHLVEAVHELSKMAKFKSALLS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00225 501 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 32 496 - -
Vian10g00225 501 Pfam Aluminium activated malate transporter 35 490 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00225 Vian-Chr10 1975195 1978612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00225 35 496 Miscellaneous Gene Families AT3G18440 34.538 4.12e-84 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00225 K25841 - gmx:102668657 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00225 10 1975195 1978612 Vian10g00225 10 1975195 1978612 ECH