Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00219 ATGCGTAGCCGGGGATCGCAGAACCGGCTTTCTGGTAACTCTTTTGGATCACGTGTTTCTGCGCTCATGCTAGCCATGATTGCTACCATGGCTACAATTTACGTTGCCGCCAGGCTATTTCAGGAGGCGGAAAGTAGGGCTTATTTAATCGAAGAGCTTGAAAAAAGAACTGGTCAGGGTCAATCTGCCGTTTCTCTTGACGATACACTGAAAGTTACAGCCTGCAGGGAACAAAGTAAGAAGTTGTCTGTCCTTGAGACCGAACTAGCTGCGGCTAGACAGGAAGGTTTTGTTCCAAAGCGCTTGCAAGGAAATAATGAGAAGCATCCTACAAAGAAAGTACTTTTAGTAGTTGGAGTGATGACAACCTTTGGTCGGAGAAAAAACCGAGATGCAATCCGTAAGGCTTGGATGCCAGCAGGTATAGCTAGGAGAGAACTGGTTGATAAGAAAGGAATCATTGTCCGATTTGTAATAGGAAGAAGTGCAAACGGCGGAGACAGTTTCGACAAAGAAATTAAAGACGAAAGCAGTCACACCAATGATTTCGTCATTCTTGATAATCAAGTGGAGGCCCCTGAAGAAAAAGCAAAAAAGATAAAATCATTCTTCATTTATGCAATAGGCAAATGGGATGCTGAATTTTATGCTAAGGTCAATGATGATGTCTATGTTAATCTCGATTCCCTTGGAGGAGTGCTAGCTTCTCATTTGGACAAGCCCCGTGTGTATATTGGTTGCATGAAATCAGGCAAAGTTTTCTCTGAGCAGACACATAAATGGCACGAGCCAGACTGGTGGAAATTTGGTGATGGAAAATCATACTTTAGACATGCTTCAGGTGAGGTCTATGTCATTTCAAAATCATTGGCTCAGTTTATTTCGATAAACAGTTTTATGCTCCGTACATATGTACATGATGATGTAAGCATTGGATCTTGGTTTATTGGGCTTGATGTACAGCACATTGATGAAACAAAACTTTGCTGCTCCTCCTGGTCCCCTGGGGCAATTTGTGTGGTACTATGA 1029 0.4266 MRSRGSQNRLSGNSFGSRVSALMLAMIATMATIYVAARLFQEAESRAYLIEELEKRTGQGQSAVSLDDTLKVTACREQSKKLSVLETELAAARQEGFVPKRLQGNNEKHPTKKVLLVVGVMTTFGRRKNRDAIRKAWMPAGIARRELVDKKGIIVRFVIGRSANGGDSFDKEIKDESSHTNDFVILDNQVEAPEEKAKKIKSFFIYAIGKWDAEFYAKVNDDVYVNLDSLGGVLASHLDKPRVYIGCMKSGKVFSEQTHKWHEPDWWKFGDGKSYFRHASGEVYVISKSLAQFISINSFMLRTYVHDDVSIGSWFIGLDVQHIDETKLCCSSWSPGAICVVL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00219 342 Coils Coil 75 95 - -
Vian10g00219 342 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 83 322 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vian10g00219 342 Pfam Galactosyltransferase 129 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vian10g00219 342 Gene3D - 104 331 - -
Vian10g00219 342 FunFam Hexosyltransferase 105 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00219 Vian-Chr10 1924946 1928487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00219 22 339 Glycosyltransferase AT5G53340 60.377 3.46e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00219 K20854 - gmx:100802753 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00219 10 1924946 1928487 Vian10g00219 10 1924946 1928487 ECH