Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00212 ATGGCTCAAACAAGAAACAAGGTAACCATTACGGAGAAACTTTTAGCGACAAAGTCATCCTCGTATTCTACCAATCTTTGGGACTGTGGCAGCACGCTCTACGATTCATTTGAGCTCAACTCCTTCAATCGTCAACTCCACTCCGCCATAGCTAAATCCCCTATAACTAGAACCCTTTCCATGCCTCACTTACCGGAGCGTTCACTTCACGCGCTTCCGGTTCAGCCTCCTCCACCTTCCATCGCCATGCCACGGAAGTTCTTCAACTTCTCTCGCTCCTTTCAAAAACTCATTCGCTCCGTTTTCAAGTCCAACAATAAAACCACCACCACCACCAGTTTCAGTTTCCATGTGCCAGAGAAATACTCCAAAGAGCGCTTCTACGTGGTTTATGATAAGTCTGGACCCGTTCTCTCCACCATCCCCGAAGTTCCAGAGTTTGAGATCGGTGCACCCTCGCCGGAGATCTCTTCCCTCGTCAGAAGGTCATCTTCGGAAAGGTTAATTACCACAAATCGCTTTGTTTTAGATCTTATTTAA 540 0.4704 MAQTRNKVTITEKLLATKSSSYSTNLWDCGSTLYDSFELNSFNRQLHSAIAKSPITRTLSMPHLPERSLHALPVQPPPPSIAMPRKFFNFSRSFQKLIRSVFKSNNKTTTTTSFSFHVPEKYSKERFYVVYDKSGPVLSTIPEVPEFEIGAPSPEISSLVRRSSSERLITTNRFVLDLI 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00212 179 PANTHER SERINE/THREONINE-KINASE 16 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00212 Vian-Chr10 1857884 1858423 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00212 - - pvu:PHAVU_002G163200g 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00212 10 1857884 1858423 Vian10g00212 10 1857884 1858423 ECH
Vian10g00212 10 1857884 1858423 Vian1g03897 1 62108425 62108997 PCT