Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00211 ATGGCGAAGGAAATTTTGACTCTTGATAATGCGACCACCTGCACATCTTGGAACCTTTCCGGTACCAGACTCGCTGCTGCTTCCGCTGATGGCACACTTTCAATCTTCGATTCCCGCGATCCATCTTCTTCTTCCTCCCTCCGCTCTACTTTCAAATCTAGGGTTCTCGAAGGAAAGATCGTGAAGATTGTTTGGGTTCCGCCAGAGTACGGTGATGCAGTCGCGTGTATTTCCGCCCATGGAATTGTGTCATTGTGGGAGGAGGTTGCAGAAGATTCGCAGTCTCTTCAGTGGAAGATGTGCAAAAGCTTTGGAGACAGTTCAAGCAAAGTCCTTGATGTTCAATTCGGGATCTCTTCGACTAGTTTGAAAATGGTTGCAGCATATTCAGATGGCAATATAAGAGTTTTTGAGCTCTTGAACCCCTTAGAACTGAGAAACTGGCAGCTTCAGGCTGAATTTCAAAATGTTATCGAGTCGGTGTCTGCATTTGGAAAGGCTTCGTGCCTCTCTGCATCCATATCTTGGAATCTACAAAAGGGTGCAAGCCAGGAATCAAGCTTCCTTGTAGGTTTTAATTCAAATACATCAGAGCTTAATTCTTCCAAGGTATGGGAATTTGATCAGGCTCATCAAAGATGGCTTCCGGTAGCAGAATTGGCACTGCCTGAAGACAAGGGTGATCAGGTTTATGCTGTTGCATGGGCACCAAATATTGGCAGACCGTATGAGATCATAGCGGTTGCAACTCACAAAGGACTTGCAATATGGCATCTTGGATTGAACCCTGACCATGATGGAAGACTCCCGGTAGACCGAGTTGCACTACTGTCAGGTCACCAGGGCATGGTGTGGCAAATGGAATGGGATATGAGTGGAATGACGTTGGCTACTACAGGGCAAGATGGAATGGTCCGATTATGGCAGTCTAATCTCAATGGCGTTTGGCATCAGCAAGCTGCATTTGAACCCACTTCGTAG 981 0.4659 MAKEILTLDNATTCTSWNLSGTRLAAASADGTLSIFDSRDPSSSSSLRSTFKSRVLEGKIVKIVWVPPEYGDAVACISAHGIVSLWEEVAEDSQSLQWKMCKSFGDSSSKVLDVQFGISSTSLKMVAAYSDGNIRVFELLNPLELRNWQLQAEFQNVIESVSAFGKASCLSASISWNLQKGASQESSFLVGFNSNTSELNSSKVWEFDQAHQRWLPVAELALPEDKGDQVYAVAWAPNIGRPYEIIAVATHKGLAIWHLGLNPDHDGRLPVDRVALLSGHQGMVWQMEWDMSGMTLATTGQDGMVRLWQSNLNGVWHQQAAFEPTS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00211 326 SUPERFAMILY WD40 repeat-like 9 311 IPR036322 GO:0005515
Vian10g00211 326 PANTHER NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER 8 324 IPR037363 GO:0005198
Vian10g00211 326 FunFam Nucleoporin SEH1 9 324 - -
Vian10g00211 326 SMART WD40_4 213 258 IPR001680 GO:0005515
Vian10g00211 326 SMART WD40_4 44 87 IPR001680 GO:0005515
Vian10g00211 326 SMART WD40_4 270 309 IPR001680 GO:0005515
Vian10g00211 326 SMART WD40_4 97 138 IPR001680 GO:0005515
Vian10g00211 326 SMART WD40_4 1 37 IPR001680 GO:0005515
Vian10g00211 326 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 277 309 - -
Vian10g00211 326 ProSiteProfiles Trp-Asp (WD) repeats profile. 277 309 IPR001680 GO:0005515
Vian10g00211 326 Pfam WD domain, G-beta repeat 277 308 IPR001680 GO:0005515
Vian10g00211 326 Gene3D - 9 323 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00211 K14299 - gmx:100780788 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00211 10 1852093 1854542 Vian10g00211 10 1852093 1854542 ECH