Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00040 ATGGCAGTGCCAATGGCAACTCTTTCTGCTCTTTCCTCCACTGCTCTTCTCAACGCCAACACAACCATAAACACCAGCAGCAGGACCATCTGCACTTTCCCACTACATTCCAACACCCACACCCGTCTCTCTTTTTCTTTCTGCTCCAAACGCACTTCCTTCACCAGCGCCGGCTCCTCCGTCAAAGACGACCAACAAACTGACTCCTCCTCTACTACCATGGTTTCCGTTGCTCCTGAAAACGACGTGGACCATGATTCTGGTTCTTTGTCTGATTCGGATGCCGGTTCTGACACCCAACAGGAAATGGACTGGAAGACCGACGAGGAGTTTAAGAAGTTCATGGGCAACCCTTCCATCGAGGCCGCCATAAAGCTTGAGAAGAAGAGAGCTGATAGAAAGCTCAAGCAACTTGACAGGGAAACCACCAACTCTAACCCCCTTTTGGGCCTTTTCAACACCTTAGTTCGTGACAACCTGCTCAGGGAAAAGGAGATGCTGCAAAAGGCCGAGGAAACTTTCAAGGCTCTTGATCTTAACCAGTTAAAGAGTTGCTTTGGGTTTGACACCTTCTTTGCAACCGATGTTCGAAGATTTGGAGATGGAGGCATTTTCATTGGCAATTTAAGGAAACCCATCGATGAGGTCATTCCCAAGTTAGAGAAAAAGCTCTCCGATGCAGCAGGACGAGATGTCGTCGTCTGGTTCATGGAAGAAAAAGCAAATGACATTACCAAACAGGCTTGTGTTGTACAACCCAAAGCAGAAATGGATCTCCAATTTGAGTCAACTAAGCTGAGTACTCCTTTGGGCTATTCTAGTGCAATTTTATTAGCTGTTACTACCTTTGGAACAGTTGCTCTGATGAGTGGCTTCTTCCTTAAACCTGATGCTACAGTCGATGACTATCTGGCTAATGTTGTGCCTCTATTTGGTGGCTTCTTATTTATTCTGGGAGTTTCAGAGATAACTACCAGGGTAACAGCAGCCCGTTATGGTGTTAAGCTTAGCCCTTCCTTCCTGGTGCCATCAAATTGGACTGGCTGCTTGGGAGTGATAAACAATTATGAATCTCTACTCCCAAACAAGAAAGCTCTTTTTGACATTCCTGTAGCCCGTACTGCTAGTGCATATTTAACTTCATTACTGCTTGCTATTGCTGCGTTTGTGGCTGATGGAAGCTTTAATGGGGGTGATAATGCATTGTACATACGGCCTCAATTTTTCTATAACAACCCTTTGCTTTCTTTCATCCAATACGTTATTGGACCTTACACAGACGATCTTGGAAATGTACTACCTTATGCCGTGGAAGGTGTTGGAGTTCCTGTTGATCCGCTTTCATTTGCTGGGCTTTTAGGGATGGTGGTGACTTCTTTGAACTTGTTGCCATGTGGGAGGCTAGAAGGAGGACGCATTGCTCAAGCCATGTTTGGAAGAAACACTGCTACTCTCTTATCTTTTGCCACTTCATTGTTACTCGGTATTGGTGGCCTCAGTGGCAGTGTTCTGTGCCTGGCATGGGGATTGTTTGCAACCTTCTTTCGGGGTGGAGAGGAAATACCCGCAAAAGACGAAATCACCCCTCTAGGAGAAAGCAGATACGCTTGGGGCGTCATCCTTGGCCTCATCTGTTTCCTCACACTTTTCCCCAATGGCGGCGGCACATTCTCCTCATCATTCCTCAGTGGTCCATTTTTCAGGGGTGACATGTAA 1716 0.4645 MAVPMATLSALSSTALLNANTTINTSSRTICTFPLHSNTHTRLSFSFCSKRTSFTSAGSSVKDDQQTDSSSTTMVSVAPENDVDHDSGSLSDSDAGSDTQQEMDWKTDEEFKKFMGNPSIEAAIKLEKKRADRKLKQLDRETTNSNPLLGLFNTLVRDNLLREKEMLQKAEETFKALDLNQLKSCFGFDTFFATDVRRFGDGGIFIGNLRKPIDEVIPKLEKKLSDAAGRDVVVWFMEEKANDITKQACVVQPKAEMDLQFESTKLSTPLGYSSAILLAVTTFGTVALMSGFFLKPDATVDDYLANVVPLFGGFLFILGVSEITTRVTAARYGVKLSPSFLVPSNWTGCLGVINNYESLLPNKKALFDIPVARTASAYLTSLLLAIAAFVADGSFNGGDNALYIRPQFFYNNPLLSFIQYVIGPYTDDLGNVLPYAVEGVGVPVDPLSFAGLLGMVVTSLNLLPCGRLEGGRIAQAMFGRNTATLLSFATSLLLGIGGLSGSVLCLAWGLFATFFRGGEEIPAKDEITPLGESRYAWGVILGLICFLTLFPNGGGTFSSSFLSGPFFRGDM 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00040 571 Coils Coil 121 141 - -
Vian10g00040 571 Coils Coil 160 180 - -
Vian10g00040 571 MobiDBLite consensus disorder prediction 56 78 - -
Vian10g00040 571 MobiDBLite consensus disorder prediction 56 102 - -
Vian10g00040 571 PANTHER ZINC METALLOPROTEASE EGY1 28 561 IPR044838 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00040 K25380 - gmx:100818502 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00040 10 295319 298805 Vian10g00040 10 295319 298805 ECH