Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00024 ATGGGTGAAGAGGCCACCAAATCCAATCCCAAGCTAACGCTGTTGCCTCTCATAGCTCTGATATTCTATGAAGTATCAGGTGGTCCTTTTGGAGTAGAAGATTCCGTGAGGGGCGGAGGTGGTCCTCTTTTCGCGTTACTCGGATTCTTCGTTTTCCCTTTAATCTGGAGTATACCAGAAGCTCTTGTTACGGCTGAACTTGCCACTACCTTCCCTCAAAACGGTGGATACGTTATCTGGATTTCCTCAGCCTTTGGACCCTTTTGGGGCTTTCAGGAAGGCTTTTGGAAATGGTTCAGCGGGGTCATGGACAATGCTCTTTACCCTGTTTTGTTCCTCGATTACATCAAACAATCCTTGCCTCTCTTTGACCGATTCACTGCTCGAATCCCTGCTCTCTTAGTCATCACATTTTCACTAACTTACTTGAATTACCGTGGCCTTCACATTGTTGGCTTTTCTGCTGTTATGCTTGCGCTGTTCTCACTTTCCCCATTTCTCATAATGGCCCTTCTTTCCATTCCATTAATAAGACCACGGCGGTGGCTTGCTGTAGATTTTGGCAAGGTGGAATGGGGAAGATACTTCAATAGTATGTTCTGGAATTTAAACTACTGGGATAAGGCGAGTACCCTTGCGGGGGAGGTTGAAAATCCAAGTAAAACGTTCCCAAAAGCACTTATTGGAGGACTAGTCTTGGTGGTCTCCTCATATTTGATCCCACTCCTTGCGGGAACAGGTGCTTTGGAGTCCTCCCCAAGTGAGTGGGCGGATGGCTATTTTGCACAGGTGGGGATGTTCATTGGTGGTTCTTGGCTCAAACTCTGGATTCAACTGGCTGCTGCTATGTCTAACCTCGGCTTGTTTGAAGCAGAAATGAGCAGTGATGCTTTTCAACTTCAAGGGATGAGCAAAATGGGAATGCTTCCAGCTGTATTTGCTTCAAGGTCTAAGTATGGAACGCCCACGGTTAGCATTTTGTTCTCTGCCACTGGAGTTATCTTCCTGTCGTGGATGAGCTTTCAGGAAATCATAGAGTCCCTCAATTTCTTATATGCCGTAGGAATGCTTCTTGAGTTTGCAGCTTTTATTACTTTGAGGTTGAACAAGCCAAATCTTTACAGACCTTACAGAGTTCCGTTGCCAACATTTTGGGCGGCCATGCTGTGTTTGCCTCCTGCTTTATTGCTTATTCTTGTAATGTGTTTGGCTTCTTGGAGAACTTTCTTTGTGAGTGGAGCTGTAATTCTCCTGGGGTTCATCCTGTACCCTATCTTAGTTCAAGCCAAAAATAAAAACTGGATTCTGTTTGAAGAAGACTCAGCTACCTTGCATTCCTCTGGCTGGCAGCAATGCCACTCAGTTGTTTCAGAACTGAATGACCTCGACCAAGAAAATAAGGGTGTTGAGCTTCTTGTGACCTCACCATTTGCTAGTGGGGAAGAAGAGTTGTGTTTAGTGCAAAGCGATTCTAAAGTTTAA 1482 0.4521 MGEEATKSNPKLTLLPLIALIFYEVSGGPFGVEDSVRGGGGPLFALLGFFVFPLIWSIPEALVTAELATTFPQNGGYVIWISSAFGPFWGFQEGFWKWFSGVMDNALYPVLFLDYIKQSLPLFDRFTARIPALLVITFSLTYLNYRGLHIVGFSAVMLALFSLSPFLIMALLSIPLIRPRRWLAVDFGKVEWGRYFNSMFWNLNYWDKASTLAGEVENPSKTFPKALIGGLVLVVSSYLIPLLAGTGALESSPSEWADGYFAQVGMFIGGSWLKLWIQLAAAMSNLGLFEAEMSSDAFQLQGMSKMGMLPAVFASRSKYGTPTVSILFSATGVIFLSWMSFQEIIESLNFLYAVGMLLEFAAFITLRLNKPNLYRPYRVPLPTFWAAMLCLPPALLLILVMCLASWRTFFVSGAVILLGFILYPILVQAKNKNWILFEEDSATLHSSGWQQCHSVVSELNDLDQENKGVELLVTSPFASGEEELCLVQSDSKV 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00024 493 PANTHER POLYAMINE TRANSPORTER PUT1 4 447 IPR044566 GO:0022857
Vian10g00024 493 FunFam Amino acid permease, putative 8 438 - -
Vian10g00024 493 Pfam Amino acid permease 15 417 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vian10g00024 493 PIRSF AA_transporter 1 443 - -
Vian10g00024 493 Gene3D Amino acid/polyamine transporter I 9 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00024 Vian-Chr10 220198 221804 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian10g00024 1 466 Organic Solute Cotransporters AT3G19553 73.166 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00024 - - vun:114172952 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00024 10 220198 221804 Vian10g00024 10 220198 221804 ECH