Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g04356 ATGAGTTTACTAGCTGAAACCAAGAAACCCCATGCTCTTCTAATCCCATTTCCAACACAAGGTCACATAAATCCATTTCTAAAACTAGCAAAGATCCTTCACAACAAAGGCTTCTACATAACATTTGTCAACACTGAATTCAACCACAAACGTTTGCTTAAGTCCATAGGTCCTAATGTTGTCAATGGTTTGCCTGATTTCAACTTTGAGACTATCCCAGATGGTCTCCCTCCCACAAACATGGATGCAACTCAAAACATTCCTGATCTTTGTGACTCTACAAGAAACCACTGTTTGGTACCTTTTTGTAATCTCATATCAAAACTCAATGATCCTCCAGTTACTTGTATGATCTCAGATGGTGTCATGTCCTTCACACTTAAAGCTTCTCATCAATTTGGGTTGCCTAATATTCTGTTTTGGGTTCATAGTGCTTGTGTTTTCATGAGCTACAAAGAATGCAAGAATCTCATGGAAAGGGTCCTAACACCACTTAAAGATGCAAGTTATCTCACAAATGAACATTTAGACACCATCATAGACTGGATCCCTGGCATGAAGAACATTACTTTAAGAGACCTTCCCGGCATATTTCACACAACAGATCCAAATGATTTAGTATTGAACTTTGTGGCAGAACAAATTGAAGTAGCTTCAAAAGCTTCTGCTATTATTCTACCAACTTTTGATGCCTTGGAATCTGATGTGTTAAATGAACTCTCCACAATGTTTCCTAAACTCTACACAATAGGTCCACTTGAGTTGTTCCATGACCAAATTTCAGAAAACAATGAATTTGAATCTATAAAATGTAATTTGTGGAAAGAAGAAAGTGAGTGTCTAAAATGGCTTGATTCACAAGAACCAAATTCTGTTCTCTATGTGAATTTTGGTAGTGTAATAGTCATGAGGCATAATCAACTTGTTGAATTGGCTTGGGGATTAGCAAATAGCAAGAAAAAATTCTTGTGGGTGATTAGGCCTGATTTAGTTAAGAGTGGAAGTGAAACATTACTTGTGCCACAAGAAATTGTAGAAGAAACCAAAGATAGAGGACTAATGGTAGGTTGGTGTCCACAAGAGAAAGTTCTAAAGCACAAAGCAGTGGGAGGATTTTTGAGTCATTGTGGTTGGAATTCAACAATTGAAAGTATAAGCAATGGGGTGCCATTAATTTGTTGTCCATTTTTCAATGACCAATTTCTCAATTGCAAGTATATTTGTAGTGAATGGAAATTTGGAATGGCGATGGATAGTGATAATGTAACAAGAGATGAAGTGGAGAAGCTTGTGGTAGAGTTGATAGAAGGTGAAAAGGGTAAGGAGATGAAGAGAAAAGCAGTTGAGTGGAAGAAAATGGCTGAAGAAGCTACCAATGTTGATGGTTCATCTTCTTTGAATTTGGAAAAATTGGTTGAACACGAGAAAGTAAAAAACCCCTCCTCCGTCTCAAATCCCTCTCTTTCACGGTTTCGTTTTGTATCGGCTATTATTTGA 1497 0.3727 MSLLAETKKPHALLIPFPTQGHINPFLKLAKILHNKGFYITFVNTEFNHKRLLKSIGPNVVNGLPDFNFETIPDGLPPTNMDATQNIPDLCDSTRNHCLVPFCNLISKLNDPPVTCMISDGVMSFTLKASHQFGLPNILFWVHSACVFMSYKECKNLMERVLTPLKDASYLTNEHLDTIIDWIPGMKNITLRDLPGIFHTTDPNDLVLNFVAEQIEVASKASAIILPTFDALESDVLNELSTMFPKLYTIGPLELFHDQISENNEFESIKCNLWKEESECLKWLDSQEPNSVLYVNFGSVIVMRHNQLVELAWGLANSKKKFLWVIRPDLVKSGSETLLVPQEIVEETKDRGLMVGWCPQEKVLKHKAVGGFLSHCGWNSTIESISNGVPLICCPFFNDQFLNCKYICSEWKFGMAMDSDNVTRDEVEKLVVELIEGEKGKEMKRKAVEWKKMAEEATNVDGSSSLNLEKLVEHEKVKNPSSVSNPSLSRFRFVSAII 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g04356 498 CDD GT1_Gtf-like 10 467 IPR002213 GO:0008194
Tsu08g04356 498 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 474 - -
Tsu08g04356 498 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 268 442 IPR002213 GO:0008194
Tsu08g04356 498 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 7 475 - -
Tsu08g04356 498 Gene3D Glycogen Phosphorylase B; 275 456 - -
Tsu08g04356 498 Gene3D Glycogen Phosphorylase B; 11 462 - -
Tsu08g04356 498 ProSitePatterns UDP-glycosyltransferases signature. 357 400 IPR035595 -
Tsu08g04356 498 PANTHER PUTATIVE-RELATED 7 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g04356 Tsu-Chr8 61449200 61453208 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g04356 7 472 Glycosyltransferase AT1G22340 52.966 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g04356 - - gmx:100813330 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g04356 08 61449200 61453208 Tsu08g04356 08 61449200 61453208 ECH