Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03032 ATGGTGAATAATTTTGTTCCAAATGGTCTTTTAATATCTAGTGAAAAAAAACCCTTTGTTCCTAAGGTACTTAACACAAATAGATGGACACAGATTGAAGAGAGGACTACAGAGTTGCTTGGATGTATTCAGCCCAGTCACAAATCAGAAATACTTCGAAAAAATGTTGTATCTTACATTAAGGGCCTCATCACAAGCCATGTCCCATGTCAGATTTTCCAATTTGGATCAGTACCCTTGAAGACTTACTTACCTGATGGTGATATTGATCTTACTGTTTTTGGCATTAATCAAGCTTTGCCTGAAACTTTCATTTCTGAGATTCTGCAAAAATTAGAAAGTCAAATAAACAATGAGTCTTCTGAATTTAGGGTTAAAGAGGTTCAATTTATCCAAGCAGAGGTGAAGATCATAAAGTGCTTGATTCAAGATTTTGTAATTGACATATCTTTCAATAAATTGAGTGGTTTATCTTCACTTTGTTTTTTTGAGGAgGTTGATAATTTGATAGGAAATAATCATATATTCAAGCAGAGTATTATATTGGTAAAAGCCTGGTGTTACCATGAGAGCCGCATCCTCGGTTCTAACAGTGGACTATTTCCGACCTATGCGCTGAAAGTTTTAGTCTTGTACCTCTTTAATCTTTATGGCAATGGATTTGCTGGACCATTTGAGGTACTTTTTCGATTTTTGGAGTTCTATAGTAAATTTGACTGGGAAAACTATTGCATTAGCTTGAGTGGACCAGTGCCTCTAAGCTCACTTCCTGATATGACAGCCGAGCCTCCAAGAAAAGATTGCCAAAGCCAAGACTTACTGCTCCCAGAGTGCTTTCTTAGTGCTTGTATGTTCTTTTACGGCAATATGCCGCGCAGccaggaaaatcaagagaaacaatttgTTTCCAAACACATAAACATTATAGATCCTTTGCGTTTAGACAACAACCTGGGGCGTAGCATCAGTAAAGCTAGCTTCTATAGGATAAGGAGTGCATTTCGTCTTGGTACTGAGAGGATGGTGAGATTGCTGCAGTGCACGGATGAGTATCTAATCGCTGAATTTGACGACGTTTTCAAAAATACATGGAATAGACATGGTAATGGCTATTGGATTCATGTAAGCATTTATAATctttatataagaaaagttGGAAAGTTAACATGGCAAGAATCTGAGGATGAGCAGGCTCAAGCTTCTAACAAGCCTgataatcaattaaaagaatCAAATCAAAAGTTTAGAACCTCTGATGCATGTGTTGTGTCTCAAACTCAAAGCTCAAGTCCGGAATCTGCTCCTATATATAGTGAGGCTCAAAATCAGCATTGCGATGTTTTTGTATCAAAAACAGAAAGCGAGCTGTtcgatttttcttcttcaatgtcTGATAGTAAGATGGGATCCACTTCAAGATCTGAAGTTCAGCAATGTTTTGGGCTGACTTCTTGTGATTTGAGAAGTGAAGATGCAGTTAAATCAAAAAATGCTTCAAATATGGGACTGCATAAGGAAGAGCCTGATTGCGCAACAATTATAGAAAGTAGCCGGACTCTCCACGCACTGATGGATCATTCTGTTGATAAGGAAGAACATGGTGGTGTTGTGAATATGACTGGAAGTAGCAGGAGTGGATATCTGGAAGCAGTAAAAGGTGTAAAGTCAAACAACAATGAGGCAATGAGGCAGAAAGAGGAAGAGCATCATTTTGTGAGTACTGCCGAAAATCGTAAGAGTCTCAAATACTTGGATGTACTATTGGGAGTGAAAAAAAGCCATACATCTTtttcaccaccaccacaacaaaATAGGTCATACTCTATAGATAAAGTTGAATTTCCGGAACTGGAACCACCGTTTCCAACTGTCAAAAGGTTAATAAATGTGGGAAAAGACAGTGTTGATCCATCTGCTGTAGTAATCAAACATGGTAATAAATTGAATCCAGCAGAAAGCTGTAAATACACACCAGCTTCGGACTCGACCTCAGAGACCAATCTTTCGTCCTTGCCTCCGGAGACTACTCAACCTGAAAATGTCCATGGTCAGTCAACTGTGAGCACGGACATCTTCAGGCATGAGAGCACCACTTCTGAATCAGTTGCTTTAAATGTTCATGCACTTCAATCAGCATGTGCATCCGGTTCCTCTGTGTTACAATTTCCATTCAAATCCGACAATACCAGTCATGTTGAACCttcaaattatttattgaaccaatcttttgatattttgtaTGGTGATTTTAAAAGCTATTGGGTGAACCTTAAATATGGGCAGCATTGTGTGAATGAACACTCAGAGGAGCCTGTGTATTTTCTCCCCACAGTTGAACTGCCAATGGATTTTCAAGAACAATATTATTGGGACACGAGACCTTCAGGTTCAGTCAACGGTGTGCCTCTCGTAGTTCCTGGCATGCCACCAATATTTGCTTCTGACTCACATATTGAGGGCATACACCGAGGTGTTTCTTTTTGGCTTCCTGGATCTAGTGGAGGCCTTGGGACTTTCATGCCAAACCCACATACTTACCATGAGAGACAATTCGTGGAAGAGTTTTACAACGAAAATCAGAATGCAAATAACATATCTGAGAGACAAGAggattcaaatttcaattcGAGGGGAAGGTCTTCTATATCCAATTACAGGCAGCGAAGAAATTTGAATTCTAATTCAAGGGAAAGGTTTTCCAGCCGTGGCCAGAATCATTACAGGCGAAATGGGATATCAGAAGGTAAGAAAGAAGCATCGCATAAAGGTGAAGGCGAAGGTTCAAGTAGTGCTGTTAATGAATTAGAAGATAAGAAAGAAGCACCAGATCAAGGTGAAGGCGAAGGGTCAAGTAGTGCCATGATTCACCATATCGGCCCTGATCATAATCCAATTTTATCCGGTGTTTGA 2910 0.378 MVNNFVPNGLLISSEKKPFVPKVLNTNRWTQIEERTTELLGCIQPSHKSEILRKNVVSYIKGLITSHVPCQIFQFGSVPLKTYLPDGDIDLTVFGINQALPETFISEILQKLESQINNESSEFRVKEVQFIQAEVKIIKCLIQDFVIDISFNKLSGLSSLCFFEEVDNLIGNNHIFKQSIILVKAWCYHESRILGSNSGLFPTYALKVLVLYLFNLYGNGFAGPFEVLFRFLEFYSKFDWENYCISLSGPVPLSSLPDMTAEPPRKDCQSQDLLLPECFLSACMFFYGNMPRSQENQEKQFVSKHINIIDPLRLDNNLGRSISKASFYRIRSAFRLGTERMVRLLQCTDEYLIAEFDDVFKNTWNRHGNGYWIHVSIYNLYIRKVGKLTWQESEDEQAQASNKPDNQLKESNQKFRTSDACVVSQTQSSSPESAPIYSEAQNQHCDVFVSKTESELFDFSSSMSDSKMGSTSRSEVQQCFGLTSCDLRSEDAVKSKNASNMGLHKEEPDCATIIESSRTLHALMDHSVDKEEHGGVVNMTGSSRSGYLEAVKGVKSNNNEAMRQKEEEHHFVSTAENRKSLKYLDVLLGVKKSHTSFSPPPQQNRSYSIDKVEFPELEPPFPTVKRLINVGKDSVDPSAVVIKHGNKLNPAESCKYTPASDSTSETNLSSLPPETTQPENVHGQSTVSTDIFRHESTTSESVALNVHALQSACASGSSVLQFPFKSDNTSHVEPSNYLLNQSFDILYGDFKSYWVNLKYGQHCVNEHSEEPVYFLPTVELPMDFQEQYYWDTRPSGSVNGVPLVVPGMPPIFASDSHIEGIHRGVSFWLPGSSGGLGTFMPNPHTYHERQFVEEFYNENQNANNISERQEDSNFNSRGRSSISNYRQRRNLNSNSRERFSSRGQNHYRRNGISEGKKEASHKGEGEGSSSAVNELEDKKEAPDQGEGEGSSSAMIHHIGPDHNPILSGV 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03032 969 MobiDBLite consensus disorder prediction 651 684 - -
Tsu08g03032 969 CDD NT_PAP_TUTase 52 157 - -
Tsu08g03032 969 MobiDBLite consensus disorder prediction 891 924 - -
Tsu08g03032 969 SUPERFAMILY Nucleotidyltransferase 30 193 IPR043519 -
Tsu08g03032 969 MobiDBLite consensus disorder prediction 931 945 - -
Tsu08g03032 969 PANTHER NUCLEOTIDYLTRANSFERASE 3 937 - -
Tsu08g03032 969 MobiDBLite consensus disorder prediction 653 684 - -
Tsu08g03032 969 SUPERFAMILY PAP/OAS1 substrate-binding domain 175 345 - -
Tsu08g03032 969 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 3 937 - -
Tsu08g03032 969 Gene3D Beta Polymerase, domain 2 45 151 IPR043519 -
Tsu08g03032 969 MobiDBLite consensus disorder prediction 866 969 - -
Tsu08g03032 969 Pfam Cid1 family poly A polymerase 227 316 IPR002058 -
Tsu08g03032 969 Coils Coil 109 129 - -
Tsu08g03032 969 MobiDBLite consensus disorder prediction 866 890 - -
Tsu08g03032 969 Gene3D - 152 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03032 Tsu-Chr8 46796418 46803094 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03032 - - cam:101495144 906.746