Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03023 atgatGTCAGATACACTTCGTTTAGCTGTTGCTGTTCTTGGCAATGCTGCCTCAGTTTCACTTTATGCTGCACCAATGGTTACATTTAGAAGAGTAATAAGGAAGAAAAGCACAGAGGAATTTTCATGCATTCCTTACATAATTGGATTGTTAAACTGTCTTCTTTTCACATGGTATGGATTACCTGTTGTAAGCTACAAATGGGAAAATTTTCCTCTTGTAACCGTTAATGGCGTTGGAATCGCTCTCGAGTTATCCTATGTTCTCATTTATTTCTGGTATTCTTCCCCCAAAGGAAAGATGAAGGTAGCTTTGATCACGACACCTGTTCTGGTTGTGTTCTGCATAACTGCAGCAGTATCAGCTTTTTGCTTACATGATTCTCCTCACAGAAAGTTACTTGTTGGTAGCATAGGCTTAGGTGTTTCTGTTGCATTGTACGGTTCTCCATTGGTTGCAATGAAAAAAGTTATTGAAACAAAGAGTGTTGAATTCATGCCACTACCATTGTCTCTTTGTGCTTTCTCAGCTAGTGTTTTCTGGTTAGCTTATGGTATCCTTGTTCGTGATATATTTGTTGCGGGTCCAAGTGTGATTGGAACTCCATTAAGCATCGTGCAGCTTGTGGTTTACTTTAAATACAGGAAAGAGAGGGTTGTGGAAGAACCAAAAATTGAGGATTTGGAAAAGGGTGGATTAGAGTTAGAGAAGGTGGTGATGGTGGAAGTGGATTTGGAGAAAGTGGAAAAGATTGTCACAAATTGTGAACAATGTTAG 777 0.3912 MMSDTLRLAVAVLGNAASVSLYAAPMVTFRRVIRKKSTEEFSCIPYIIGLLNCLLFTWYGLPVVSYKWENFPLVTVNGVGIALELSYVLIYFWYSSPKGKMKVALITTPVLVVFCITAAVSAFCLHDSPHRKLLVGSIGLGVSVALYGSPLVAMKKVIETKSVEFMPLPLSLCAFSASVFWLAYGILVRDIFVAGPSVIGTPLSIVQLVVYFKYRKERVVEEPKIEDLEKGGLELEKVVMVEVDLEKVEKIVTNCEQC 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03023 258 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 258 - -
Tsu08g03023 258 Pfam Sugar efflux transporter for intercellular exchange 11 98 IPR004316 GO:0016021
Tsu08g03023 258 Pfam Sugar efflux transporter for intercellular exchange 134 217 IPR004316 GO:0016021
Tsu08g03023 258 PANTHER RAG1-ACTIVATING PROTEIN 1 5 258 - -
Tsu08g03023 258 Gene3D - 134 224 - -
Tsu08g03023 258 Gene3D - 11 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03023 Tsu-Chr8 46025532 46027321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03023 2 257 Miscellaneous Gene Families AT5G53190 52.290 1.63e-98 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03023 K15382 - gmx:100813119 387.111