Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g03000 atgaagAGTAGAGGATCGAACCATAAACTCTCCTCTATGGCTAATCGATCTCGAATTCCTTCACTATTCATCTCCATGTTCGCAACTTTCGCTACTATCTACGTCGCCGGAAGATTATGGCAAGACGCAGAGAATCGTGTTTATCTCATCAAACAGCTTGATAGAATCACTGGTCAAGGACAATCTGCTATATCGGTGGATGATACATTGAAGATCATAGCTTGTAGGGAACAACATAAGAAACTTGATGCGCTTGAGATGGAACTTGCTGCAGCTAAACAAGAGGGTTTTGTTTCAAAGGGGTTGATTGAGACCAACGGGACTTACTCTAAGAGAAGGCCCTTGGTAGTCATAGGTATACTGACAAAGTTTGGCCGGCAGAAGAATAGAAATGCCATTCGTAAGGCTTGGATGGGAAGTGGTGCAGCTTTGAAGAAAGTAGAAGATGAAAAGGGCATCATTGTGCGATTTGTTATTGGTAGAAGTCCAAATCGCGGAGACAGTCAGGATAAAGACATTGATCGTGAAAGTAGGTTGACGAATGACTTCCTAATTCTAGATGATCATGTAGAAGGAAACCAGGGACACCCAGAGAAGGCTAAATTGTTTTTTGCTCATGCTGCAGAGGAATGGAATGCGGAGTTTTATGCTAAAGTCAATGATGATGTTTATGTAAATATTGATGCCTTGGGAGCTACACTTGCAACTCATTTGGACAAACCCCGTCTTTACATGGGATGCATGAAATCAGGCGAAGTTTTCTCTGAAAAGAACCATAAATGGTATGAACCAGAATGGTGGAAGTTTGGTGACAAAAAATCATATTTTCGTCATGCATCAGGAGAGACGTATGTCATATCACGAGCTTTGGCTAAATTCATATCGATAAACAGGTCAGACCCACTCTTTGCTGCACCAATATTGTTAGCAACTGTTTATGCATCAATCATGAATCTGTTGAGTTGTCAGATCTATTCTTCGTACCTATGCCTATGA 996 0.4106 MKSRGSNHKLSSMANRSRIPSLFISMFATFATIYVAGRLWQDAENRVYLIKQLDRITGQGQSAISVDDTLKIIACREQHKKLDALEMELAAAKQEGFVSKGLIETNGTYSKRRPLVVIGILTKFGRQKNRNAIRKAWMGSGAALKKVEDEKGIIVRFVIGRSPNRGDSQDKDIDRESRLTNDFLILDDHVEGNQGHPEKAKLFFAHAAEEWNAEFYAKVNDDVYVNIDALGATLATHLDKPRLYMGCMKSGEVFSEKNHKWYEPEWWKFGDKKSYFRHASGETYVISRALAKFISINRSDPLFAAPILLATVYASIMNLLSCQIYSSYLCL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g03000 331 Gene3D - 109 303 - -
Tsu08g03000 331 Coils Coil 75 95 - -
Tsu08g03000 331 Pfam Domain of unknown function (DUF4094) 18 94 IPR025298 -
Tsu08g03000 331 Pfam Galactosyltransferase 129 299 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tsu08g03000 331 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 299 IPR002659 GO:0006486|GO:0016020|GO:0016758
Tsu08g03000 331 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT1 1 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g03000 Tsu-Chr8 45650890 45656771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g03000 21 298 Glycosyltransferase AT5G53340 68.705 1.19e-146 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g03000 K20854 - gmx:100779561 530.406