Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02990 ATGCCACCACCAAAAGAATCAGAGAAGAATCATGTGACATATATGCATACAGTTTCCGAAGCTGGTCGTCTTCTCCCTTCATCTAGTCGCTGGAACTCCATAGCACTTGATTTCAACCTTACTCCTAAGTCTTCTGCTTCCTATGAATCCATCCCTTCCCAATATCCAAAATCTGTTGACTGCAATCTTGTCATCACTGATAAGAAACACttccatatttttatttttgttacacTAGCAATTTTTTTTGCTATCATAGCAGTAGCTCTTCTTGTGCATTTTTTACCTCAGAAGGATAAGCATCAAGACTCTTCAATCAATCTCAAGTTGGCAATAAATCAAGCTCTAACATTTTATGATGCCCAAAAATCTGGGAATTATCCAAAGAACAGTCCAGTGAAATATAGGGGAGACTCAGGATTAAAAGATGGGAATCAAGCAAAGACTAATCTTATTGGTGGATATTATGACTCAGGCAACAACATTAAGTTTACATTCACCACAGCTTATACTATGACCTTGTTGAGTTGGTCTGCAGTGGAATATCAAACTAAATATGCTGATATTGATGAGCTTGATCATGTCAAGGATATCATCAGATGGGGTACTGACTATTTGCTTAAGGCATTCATTCCTCCAAATGGATCCAACAACCTTAGACTGTATTCCCAGGCAAGATATAATACCATTAGTACTAATAATGAACAAAACGATATAAGTTGCTGGCAAAGACCTGAAGACATGAGTTATGCGAGACCAGTATCAGTTTGTGATGGATCTGCTACAGATTTAGCTGCTGAAATCGTAGCTGCATTATCTTCAGCATCTATGGtattcaatgatgacaaagatTACTCAGGGAAACTAGTTCTAGCAGCAGAAAGGCTATATGAGGTAGTTACAAGGGAAGATCCTAAGAAGCAAGGGACCTACACGAGTGTTGATGCATGTGGAAAACAAGCAAGAACGCTCTATAACTCGTCTAGTTACCAAGACGAGTTGGCTTGGGGAGCAACTTGGTTATTTCTTGCTACTAAAAAAACTCATTATCTTGCAAATgcaactgatttttttttatctgcaAAGAGTGATGAAACAAATTTAGACAAAGAGGTTTTTTATTGGAATAACAAGCTCAATGCTGTTGCGGTTTTGCTTTCTGGTATTCGTTATTTCCAAGATCCTGGCTTTCCGTATGAGGATGTTTTGAAACTTTCGTCAAACTCTACTCATTCACTCATGTGTTCGTaccttttcaaaaaatatatgagCAGAACAACCGGTGGATTGATTATCCCAAAACCTGAGAATGGGCCATTACTTCAGTATGCAGCAACAGCGTCTTTTCTCAGTAAATTGTATAGTGATTACATTGATCATCTCAAAATATCTGGAGCAAGCTGCGAAACCGATGAATTCTCAGTCGCAATGCTTCGCGATTTTGCTAGGTCTCAGGTTAACTACATCTTAGGACAAAATCCTATGAAAATGAGCTATTTAGTGGGCTATGGTGATAAGTTCCCAGTCCATGTTCATCACAGAAGTGCATCTATCCCTTGGGATAAACGGACCTACAATTGCGATGATGGTAAGACATGGCTAAACTCGAAAAATCCGAATCCACAAATTCTTTTGGGAGCCATGGTGGGAGGACCAGACACAAATGATAATTTCATTGATCAAAGGAGTAACCAAAGGTTCAATGAGCCAACTATAGCAAGCAATGCTGGCTTAGTTGCAGCATTGGTTGCACTTCAAGATCTTCCTAATAACTCAGATGGCTTGAAAAACTCATTGTGGGAATGGACTTGA 1812 0.3758 MPPPKESEKNHVTYMHTVSEAGRLLPSSSRWNSIALDFNLTPKSSASYESIPSQYPKSVDCNLVITDKKHFHIFIFVTLAIFFAIIAVALLVHFLPQKDKHQDSSINLKLAINQALTFYDAQKSGNYPKNSPVKYRGDSGLKDGNQAKTNLIGGYYDSGNNIKFTFTTAYTMTLLSWSAVEYQTKYADIDELDHVKDIIRWGTDYLLKAFIPPNGSNNLRLYSQARYNTISTNNEQNDISCWQRPEDMSYARPVSVCDGSATDLAAEIVAALSSASMVFNDDKDYSGKLVLAAERLYEVVTREDPKKQGTYTSVDACGKQARTLYNSSSYQDELAWGATWLFLATKKTHYLANATDFFLSAKSDETNLDKEVFYWNNKLNAVAVLLSGIRYFQDPGFPYEDVLKLSSNSTHSLMCSYLFKKYMSRTTGGLIIPKPENGPLLQYAATASFLSKLYSDYIDHLKISGASCETDEFSVAMLRDFARSQVNYILGQNPMKMSYLVGYGDKFPVHVHHRSASIPWDKRTYNCDDGKTWLNSKNPNPQILLGAMVGGPDTNDNFIDQRSNQRFNEPTIASNAGLVAALVALQDLPNNSDGLKNSLWEWT 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02990 603 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 488 514 IPR018221 -
Tsu08g02990 603 Gene3D - 105 589 IPR012341 GO:0005975
Tsu08g02990 603 PANTHER ENDOGLUCANASE 22 596 - -
Tsu08g02990 603 SUPERFAMILY Six-hairpin glycosidases 109 593 IPR008928 GO:0005975
Tsu08g02990 603 Pfam Glycosyl hydrolase family 9 111 582 IPR001701 GO:0004553|GO:0005975
Tsu08g02990 603 PANTHER ENDO-1,4-BETA-GLUCANASE 22 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02990 Tsu-Chr8 45500823 45503486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02990 57 585 Glycoside Hydrolase AT5G49720 45.018 1.75e-139 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02990 K01179 - gmx:100805472 947.962