Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02980 ATGGGTTTGATGGATATTTTGTGTGCTTCCATGTTTCTTTTTATGGTCGCTGAGTCCACTAGCAGATCAGGGAGTATGTGGCCCAACAACGTAGGTGTGGAGTCTACAGGAACTGTTAGCTGGACAGTCTTCAGTGCAAGTATATTTGTGCTTGTTGCCCTTGTTCTCTCCATGTACCTAATATTCGAGCATTTAGCTGCCTATAATCAGCCCGAGgagCAGAAGTTTTTGATTGGTCTCATTTTAATGGTTCCTGTCTATGCATTGGAATCGTTTTTGTCACTATTGGATTCCAGTGCGGCATTTAACTGTGAAATTATCCGGGACTGCTATGAGGCTTTTGCATTATATTGCTTTGAGAGATACCTGATAGCTTGCTTAGGTGGTGAGGACAAAACAATTCAATTTATGCAAAGTACGAGTGTAACAGACTCCAGCACTCCTCTCCTGAAAGAAGCGTATGCATATGGAGTTGTAGAACATCCATTTCCTTTAAATTGGTGCTTAAGAGATTGGTATCTTGGCCCTGACTTCTATCAATCTGTGAAAATTGGCATCGTACAATATATGATACTGAAAATGATCTGTGCATTGCTGGCAATGATCCTTGAGTCTTTTGGGGTTTATGGAGAGGGGAAGTTTGAATGGAGATATGGGTATCCCTACTTGGCAAGTATTCTTAATTTTAGTCAGACTTGGGCCCTGTATTGCCTTGTACAATTCTATTCTGTCATTAAAGATAAACTGGAGCCAATCAAACCATTAGccaaatttttaacatttaaatCAATAGTCTTTCTAACATGGTGGCAAGGATTGGCTGTCGCATTTCTTTTTTCTATGGGAGCATTTAAAGGGTCACTGGCTCAAGAGCTGAAAACACGTATACAAGACTATATCATCTGCATAGAGATGGGCGTTGCTGCTGTTGTGCACCTTTATGTCTTCCCAGCAGTACCTTACAAAAGAGGGGAGAGGTGTGTCCGCAATGCATCAGTGATGGCTGACTATGCGTCACTAGGGACACCACCTGATCCATCAGAGGTTCGTGACTGTGAGCGCTCAACTAGAGTGCGGCTGGGCCGCAATGGTGAGAAAGATAAGAAGCCTATGAAGTTTCCACATAATGTCCGTGACGTGGTTCTTGGAAGTGGTGAAATTATTGTCGATGACATGAAATTTACAGTTTCACACGTGGTAGAACCTGTTGAAAGGGGCATTTCAAAGATAAACAAAACCTTCCATCAGATATCAGAAAATGTAAAACGCCATGATGAAGAGCGGAAGAGAAGCACCAAGGATGATAGCCACCTTGTTCCCATGCGTTCATGGAGAACAGAATTTTCTGATGTTCACGACAAACTTGTGGAAGGAAGTGTCAGTGATAGTGGGGTGTCCAGCGGAAAAAGAAATGCTCAATCCAAGGCGTCAGCCTCCAGGATGAGAAGATAG 1452 0.4229 MGLMDILCASMFLFMVAESTSRSGSMWPNNVGVESTGTVSWTVFSASIFVLVALVLSMYLIFEHLAAYNQPEEQKFLIGLILMVPVYALESFLSLLDSSAAFNCEIIRDCYEAFALYCFERYLIACLGGEDKTIQFMQSTSVTDSSTPLLKEAYAYGVVEHPFPLNWCLRDWYLGPDFYQSVKIGIVQYMILKMICALLAMILESFGVYGEGKFEWRYGYPYLASILNFSQTWALYCLVQFYSVIKDKLEPIKPLAKFLTFKSIVFLTWWQGLAVAFLFSMGAFKGSLAQELKTRIQDYIICIEMGVAAVVHLYVFPAVPYKRGERCVRNASVMADYASLGTPPDPSEVRDCERSTRVRLGRNGEKDKKPMKFPHNVRDVVLGSGEIIVDDMKFTVSHVVEPVERGISKINKTFHQISENVKRHDEERKRSTKDDSHLVPMRSWRTEFSDVHDKLVEGSVSDSGVSSGKRNAQSKASASRMRR 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02980 483 Pfam Organic solute transporter Ostalpha 44 321 IPR005178 -
Tsu08g02980 483 PANTHER ORGANIC SOLUTE TRANSPORTER SUBUNIT ALPHA-RELATED 10 477 - -
Tsu08g02980 483 MobiDBLite consensus disorder prediction 458 483 - -
Tsu08g02980 483 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 10 477 IPR005178 -
Tsu08g02980 483 MobiDBLite consensus disorder prediction 460 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02980 Tsu-Chr8 45446359 45451655 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02980 - - ccaj:109791436 830.091