Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02937 ATGGCCCTTGAGAATTGTTTAAGAGTATCCACACCAAGACCTCATTGTCTTCCTCCATTGTTTTCAACTTCAAGGGAAAAGCTTGTTTTCTCAGCTCAAAAAGTAGGATTCAAGAAATCTGTGCTCAACTCAACACTATCACTCCCTTCTGGTGTTGCCTACAGAAAATCACGTTTTATTTGCAATGCTCGTGAAGCTGTAAATGAAGCAGCTCAGGTAGTGGCTGACTCAAGCTGGGATGAGCTTGTTCTTGCAAGTAAAATCCCTGTGCTGGTAGATTTTTGGGCACCATGGTGTGGTCCATGCAGGATTATAGCACCTATTATTGATGAGTTAGCCAAAGATTATGCTGGAAAAATTGCATGCTACAAGCTCAACACAGATGAATCTCCAAACACAGCAACAAAGTATGGCATCAGAAGCATTCCAACTGTTCTATTCTTCAAGAATGGAGAGAAACTAGAAAGTGTGATTGGTGCAGTTGATAAGTCTACTCTGATCTCAAAAGTGGATAAATATATTGCATGA 528 0.4053 MALENCLRVSTPRPHCLPPLFSTSREKLVFSAQKVGFKKSVLNSTLSLPSGVAYRKSRFICNAREAVNEAAQVVADSSWDELVLASKIPVLVDFWAPWCGPCRIIAPIIDELAKDYAGKIACYKLNTDESPNTATKYGIRSIPTVLFFKNGEKLESVIGAVDKSTLISKVDKYIA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02937 175 CDD TRX_family 77 171 - -
Tsu08g02937 175 PANTHER GEO12009P1 50 174 - -
Tsu08g02937 175 Pfam Thioredoxin 72 171 IPR013766 -
Tsu08g02937 175 SUPERFAMILY Thioredoxin-like 70 174 IPR036249 -
Tsu08g02937 175 TIGRFAM thioredoxin: thioredoxin 76 172 IPR005746 GO:0015035
Tsu08g02937 175 Gene3D Glutaredoxin 72 175 - -
Tsu08g02937 175 PANTHER THIOREDOXIN M-TYPE PROTEIN 50 174 - -
Tsu08g02937 175 ProSiteProfiles Thioredoxin domain profile. 60 175 IPR013766 -
Tsu08g02937 175 PRINTS Thioredoxin family signature 138 149 - -
Tsu08g02937 175 PRINTS Thioredoxin family signature 98 107 - -
Tsu08g02937 175 PRINTS Thioredoxin family signature 90 98 - -
Tsu08g02937 175 ProSitePatterns Thioredoxin family active site. 91 109 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02937 Tsu-Chr8 44885622 44886602 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02937 K03671 - gmx:100500292 258.84