LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu08g02912	ATGGAAATTGAAATGCCTGTTGTGATTGTAGGTGCAGGGCCTGCTGGCTTAGCAACATCAGCATGTcttaataaattttcaatcccaAACATTGTCTTAGAAAAAGATGATTGTCATGCATCTCTTTGGAGGAAAAGAGCTTATGATCGTATAAAACTTCACTTGGCTAAAGAATTTTGTAACCTACCTCACATGCCATTGTCATCCGATTTACCAAAATTTGTCCCTAGGGTTGATTTTCTCCGTTATTTAGACGATTACGTGATTAATTTTAAGATATCTATCCGGTACAACCGGTATGTCAATGATGCATCTTTTGATGTTAATAGCGGGAAATGGAGGGTTATTGTGAAGGAAAGTACATTAAATGTTGAGGAGATTTATGTTGCTGATTATCTTGTGGTTGCAACCGGAGAAAATTGTGATGCTTATATTCCCATGATAAATGGGCTTGAAAACTTTGAAGGTGAATACCTTCATTGTAGCAAATATTTGAATGGAAGATCATGGTATGATAAGAATGTGTTGGTTGTTGGAAGTGGAAATTCTGGAATGGAGATTGCTTATGATCTCTCAACTTGGGGTGCAAATACCTCCATGGTTATAAGAAGTCCCGTACATTATTTCACAAAAGAAATGGTGTATGTGGGAATGTCTTTGCTGAAATACATAAGTATTAATAAGGTGGATAAGTTGATGGTGGCTATGAGCAAACTAAAGTATGGTGACATGTCTAAGTATGGCTTGGTCAGACCAAAAGTAGGACCTCTTGCCTTAAAATTGAGTGGTGGTCACACTCCTACCATTGATGTTGGTTGCATAAAAAAGATTAAGAAAGGCAAAGTAAAGGTATACCCCGCTATTGCAAGCATAAAAAAGGGCAATATTGTTGAGTTTGAGAATGGAAAAAGTGGTCAATTTGATGTCATAATTTTTGCTACCGGATACAGAACCAATGTGCAAAAATGGCTTAAGGATTACAAAGAGCTGTTCAATGAGAATGGATTTCCAAAAAAATGTTATCCAAATCACTGGAAAGGAGGAAATAGAATTTACTGTGCTGGATTCTCAAAAAATGGATTACAAGGAATTGCTTATGATGCTCAGAAAATAGCAGATGATATCAATTTCACTATTAATGCAAGGAAGTTGCATGCTGCTGCTAATGCAAATGCTCAAATCAAGTTATTAGATGATTGTGTTTTTCAGTAA	1212	0.3573	MEIEMPVVIVGAGPAGLATSACLNKFSIPNIVLEKDDCHASLWRKRAYDRIKLHLAKEFCNLPHMPLSSDLPKFVPRVDFLRYLDDYVINFKISIRYNRYVNDASFDVNSGKWRVIVKESTLNVEEIYVADYLVVATGENCDAYIPMINGLENFEGEYLHCSKYLNGRSWYDKNVLVVGSGNSGMEIAYDLSTWGANTSMVIRSPVHYFTKEMVYVGMSLLKYISINKVDKLMVAMSKLKYGDMSKYGLVRPKVGPLALKLSGGHTPTIDVGCIKKIKKGKVKVYPAIASIKKGNIVEFENGKSGQFDVIIFATGYRTNVQKWLKDYKELFNENGFPKKCYPNHWKGGNRIYCAGFSKNGLQGIAYDAQKIADDINFTINARKLHAAANANAQIKLLDDCVFQ	403

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu08g02912	403	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	4	385	-	-
	Tsu08g02912	403	Pfam	Flavin-binding monooxygenase-like	7	318	IPR020946	GO:0004499\|GO:0050660\|GO:0050661
	Tsu08g02912	403	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	6	28	-	-
	Tsu08g02912	403	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	170	194	-	-
	Tsu08g02912	403	SUPERFAMILY	FAD/NAD(P)-binding domain	5	237	IPR036188	-
	Tsu08g02912	403	PANTHER	INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED	4	385	-	-
	Tsu08g02912	403	SUPERFAMILY	FAD/NAD(P)-binding domain	172	361	IPR036188	-
	Tsu08g02912	403	Gene3D	-	2	382	IPR036188	-
	Tsu08g02912	403	PRINTS	FAD-dependent pyridine nucleotide reductase signature	7	26	-	-
	Tsu08g02912	403	PRINTS	FAD-dependent pyridine nucleotide reductase signature	174	192	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu08g02912	Tsu-Chr8	44450059	44462874	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu08g02912	K11816		-	gmx:100818396	603.979