Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02899 ATGGCGCCGGGGAAGAATTCCCGAGGGGGCGAGGGGAGGAACTCATCAAACTACTGTTCAACAGTTCCAGTAGCTGTGTTTGTTGCATTTTGTTTAGTTGGTATATGGATTGCAATGTCATCCATTGTTCCGGTTCAGGATTCAGTCATGGAAGTACCCGAGACAATTAATGAGGTGAAAAATATTGCTAATCAAACTGGTTCTAAGCAATTTGAAGACAAGTTAGGCGATATATCACCAGAGGAATCAGCAAGGAGAGATAGCCAAACCCCAAGTCCTCAGAGCGAAAGCCATTCAGAATCTGTAGAAACAGAAACACCAAATGGACAAATTGATGATAATCAACTCAAAGGATCGACGGAAACTTTAGATGAAAGTAAATCTGATAAGAGCTTAGATGATAGCAAATTAGGGACAGACAATAGTGTCGGTGAAGTCACACAACAAGACGAGATTTACGGTGAGACTAAGGAGGAGGAAACCAAGAAAAATATGGATTCAGAGACAAACCAAAGTACTGGAGATAGTAACGTGGAAAGCcatgaaacttcaaaagaaGAAACTTCAAGTGAATCGGAGAAGTCTTCAATCTCTATTGATGATAGCAGCAAATACGATTGGAAACTTTGTAATACAACTTCAGGATCAGAGTACATCCCTTGTCTCGACAATTGGAAAGCAATTAGAAAACTCCCAAGCATAAGTCACTATGAACATCGAGAGAGGCACTGTCCGGATGAAGTTTCCACTTGTCTCGTTTCTCTTCCGGATGGCTATAGAAGCCCAATTAGGTGGCCCAAAAGCAGGGAAATGATATGGTACAACAATGCTCCTCATACAAAGCTTGTAGAATCTAAGGGTCATCAAAACTGGATTAAAGTTTCTGGTGAATACCTTAGTTTTCCTGGCGGTGGAACTCAGTTTAAGCATGGTGCTCTTCATTACATCGAATTCATTCAGAAATCTCTTCCTAATATTGCGTGGGGGAAGAGAAGTCGTGTGGTATTGGATGTTGGGTGTGGTGTAGCGAGCTTTGGTGGCTATTTGTTTGAAAAAGATGTTCTGACCATGTCATTTGCTCCTAAAGATGTGCATGAGGCGCAAGTTCAATTTGCACTCGAAAGGGGTATTCCTGCAATTTTAGGTGTCATGGGCACGAAAAGATTACCATTCCCTGGTTCTGTCTTTGATCTTCTCCACTGTGCTCGTTGTAGAGTCCCTTGGCACATAGAAGGTGGCAAGCTACTCTTAGAGCTGAATCGTGTCTTGCGGCCTGGTGGTTACTTTGTATGGTCGGCTACTCCGGTGTATCAAAAGGATCCAGAAAATGTTGGGATTTGGAATGACATGCGTACAGTTACAAAGTCAATGTGCTGGGATCTTGTGGTTATTGCAAAAGACAAATTGAATGGAGTGGCAGCGGCAATATATAGAAAACCGACCGACAATGAATGCTATGAGCGAAGACCGAAAAATGAACCGCCAATGTGTAGTGAATCCGATGATCCAAATGCAGCCTGGAATGTATCACTACAAGATTGTATGCACAAAGTGCCATTAGGTGCATCAGAGCGTGGATCAATCTGGCCGGAGCAATGGCCACTGAGGTTGGAGAAACCTCCTTACTGGTTAAACTCTCAGACCGGTGTTAATGGAAGAGATGCTTCGGTGGAATTCACCGCCGACTACAAGCATTGGAAAGTTGTTATTTCACATTCATATTTGAATGGAATGGGAATCAATTGGTCTTCAGTGCGAAATGTCATGGACATGAGAGCTCTTTATGGAGGATTTGCCGCGGCACTTAAAGCGTTGAAATTTAATGTTTGGGTAATGAATGTAGTTCCAACCGATTCTTCAGACACATTGCCTCTAATATACGAGCGTGGATTATTCGGTATTTATCATGATTGGTGTGAGTCGTTTAGTACCTATCCTCGATCTTACGATCTTCTCCATGCTGATTCTTTATTCTCAACAATTAAAGAAAGGTGCAACTTAGTGGCAGTGATTGCAGAAGTTGATAGAATGTTGAGACCAGAAGGATATTTGATAATAAGAGACAATGAAGAAATAATCGGTGAGATAGAAAACATGGCAAAATCTCTACATTGGGATATTCGGTCAAGTTATGCGAAAAATGGGGAGGGTTTACTTTGTCTTCAGAAGACATTTTGGAGACCAACAGAGGTTGAAACTATTGTATCAGCCATTGCTTGA 2220 0.4167 MAPGKNSRGGEGRNSSNYCSTVPVAVFVAFCLVGIWIAMSSIVPVQDSVMEVPETINEVKNIANQTGSKQFEDKLGDISPEESARRDSQTPSPQSESHSESVETETPNGQIDDNQLKGSTETLDESKSDKSLDDSKLGTDNSVGEVTQQDEIYGETKEEETKKNMDSETNQSTGDSNVESHETSKEETSSESEKSSISIDDSSKYDWKLCNTTSGSEYIPCLDNWKAIRKLPSISHYEHRERHCPDEVSTCLVSLPDGYRSPIRWPKSREMIWYNNAPHTKLVESKGHQNWIKVSGEYLSFPGGGTQFKHGALHYIEFIQKSLPNIAWGKRSRVVLDVGCGVASFGGYLFEKDVLTMSFAPKDVHEAQVQFALERGIPAILGVMGTKRLPFPGSVFDLLHCARCRVPWHIEGGKLLLELNRVLRPGGYFVWSATPVYQKDPENVGIWNDMRTVTKSMCWDLVVIAKDKLNGVAAAIYRKPTDNECYERRPKNEPPMCSESDDPNAAWNVSLQDCMHKVPLGASERGSIWPEQWPLRLEKPPYWLNSQTGVNGRDASVEFTADYKHWKVVISHSYLNGMGINWSSVRNVMDMRALYGGFAAALKALKFNVWVMNVVPTDSSDTLPLIYERGLFGIYHDWCESFSTYPRSYDLLHADSLFSTIKERCNLVAVIAEVDRMLRPEGYLIIRDNEEIIGEIENMAKSLHWDIRSSYAKNGEGLLCLQKTFWRPTEVETIVSAIA 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02899 739 CDD AdoMet_MTases 335 430 - -
Tsu08g02899 739 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 120 736 IPR004159 GO:0008168
Tsu08g02899 739 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 64 IPR004159 GO:0008168
Tsu08g02899 739 MobiDBLite consensus disorder prediction 179 198 - -
Tsu08g02899 739 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 240 494 IPR029063 -
Tsu08g02899 739 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 584 701 IPR029063 -
Tsu08g02899 739 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 217 714 IPR004159 GO:0008168
Tsu08g02899 739 MobiDBLite consensus disorder prediction 85 117 - -
Tsu08g02899 739 MobiDBLite consensus disorder prediction 78 198 - -
Tsu08g02899 739 PANTHER METHYLTRANSFERASE PMT25-RELATED 120 736 - -
Tsu08g02899 739 PANTHER METHYLTRANSFERASE PMT25-RELATED 4 64 - -
Tsu08g02899 739 MobiDBLite consensus disorder prediction 118 136 - -
Tsu08g02899 739 Gene3D Vaccinia Virus protein VP39 301 466 IPR029063 -
Tsu08g02899 739 MobiDBLite consensus disorder prediction 151 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02899 Tsu-Chr8 44223073 44228258 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02899 - - gmx:100793395 1140.95