Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02887 ATGGATTCATGTCAATTGTTGTGTGAGTTTCAAATTGAACCCCACGTGCCAAAGAATTTCATTTGGCCAAAGGAATATCTAGAGGATGCTCATGAAGAACTCCAAGCACCAATAGTAGATCTTGATGGATATCTCAAAGGGAACAATGAGGcaacaaaaaatgcatctaaGCTCATAAATGAGGCTTGTTTAAACCATGGTTTTTTCCAAGTTATTAATCATGGTATTGATATGAACCTCATTGCTAAAGCTTATGATGAAATGGACACTATTTTTAAACTTCCACTTGATAGGAAAATGAGTGTTTATAAGACACATGGTTCTATGTGGGGATATTCAGGTGCTCATGCTCATCGTTTCTCTTCTAAATTGCCATGGAAGGAAACTTTCTCTTTCCCTTATTATGTCAACAATGCTTTGAAGCCTGTTGTTACTAACTACTTCAAATCTACCTTAGGGGATGATTTTGAACAAGCTGGAGTGACATTTGAGAAGTACTGCAAGGCAATGAAAGAGTTGGGAATGATGCTAACTGAACTATTGGCAATAAGCTTAGGAGTGAAAGATCCATTGCATTTCAGAGAGTTGTTTGAAGAAGGTTGTTCCATCATGAGATGCAACAATTACCCATGTTGCAAACAACCTAGTCTTGTCCTTGGGACAGGACCTCATTGTGATCCAACTTCTATAACACTACTTCACCAAGATCAAGTTGGAGGGCTTCAAGTATTTGTTGACAACAAATGGCACACGGTTCGACCCCTACCTAACGCGCTCGTCGTTAATATTGGAGATACTTTCATGGCATTATCAAATGGAAGGTACAAAAGTTGCTTACATAGGGCTGTGGTTAACAAGCATAAGGAGAGAAGGTCCTTAGCATTCTTTCTATGTCCTAAAGATGATAAGGTTGTGAGACCCCCTAAAGATATTATTAGCAGAGATGGGACCAAACACTATCCTGATTTTACATGGTCAGATTTGCTTGAATTTACTCAAAATCATTACAGAGCAGATGAATCTACACTCTCAAATTTCACCAATTGGTTGCTATGTTCCAAACCACAAATTTAA 1074 0.3771 MDSCQLLCEFQIEPHVPKNFIWPKEYLEDAHEELQAPIVDLDGYLKGNNEATKNASKLINEACLNHGFFQVINHGIDMNLIAKAYDEMDTIFKLPLDRKMSVYKTHGSMWGYSGAHAHRFSSKLPWKETFSFPYYVNNALKPVVTNYFKSTLGDDFEQAGVTFEKYCKAMKELGMMLTELLAISLGVKDPLHFRELFEEGCSIMRCNNYPCCKQPSLVLGTGPHCDPTSITLLHQDQVGGLQVFVDNKWHTVRPLPNALVVNIGDTFMALSNGRYKSCLHRAVVNKHKERRSLAFFLCPKDDKVVRPPKDIISRDGTKHYPDFTWSDLLEFTQNHYRADESTLSNFTNWLLCSKPQI 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02887 357 Pfam 2OG-Fe(II) oxygenase superfamily 204 299 IPR044861 -
Tsu08g02887 357 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 197 299 IPR005123 -
Tsu08g02887 357 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 353 - -
Tsu08g02887 357 Gene3D - 2 337 IPR027443 -
Tsu08g02887 357 PRINTS Isopenicillin N synthase signature 224 245 - -
Tsu08g02887 357 PRINTS Isopenicillin N synthase signature 287 305 - -
Tsu08g02887 357 PRINTS Isopenicillin N synthase signature 59 76 - -
Tsu08g02887 357 PANTHER GIBBERELLIN 20-OXIDASE 10 353 - -
Tsu08g02887 357 Pfam non-haem dioxygenase in morphine synthesis N-terminal 37 136 IPR026992 -
Tsu08g02887 357 SUPERFAMILY Clavaminate synthase-like 14 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02887 Tsu-Chr8 44082355 44086393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02887 15 351 Glycosyltransferase AT5G59530 27.714 1.44e-34 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02887 K05282 - gmx:100776707 574.704