Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02840 ATGGCAGTCCCAGTTATTGATTTCTCAAAGCTGAATGGTGAAGAAAGAGCCAAAACTATGGCACTTATTGCTAATGGCTGTGAAGAATGGGGATTCTTTCAGTTGATCAATCACGGCATTCCGGAGGAACTTCTTGAAAGGGTGAAGAAGGTTTCCACTGAGTTCTATAAGCTGGAAAGAGAAGAGAATTTCAACAACTCCCCAACAGTGAAGCTTCTGAATGATATAGCTGAAAAGAAGAGCAGTGAAAAGCTGGAGAATGTGGATTGGGAGGATGTTATTACTCTCCTCGATGATAACGAATGGCCAGAAAATACACCAAGTTTCAGGGAAACCATGTTAGAATATCGATCTGAGTTAAAGAAACTAGCAGAGAGTCTCACAGAAGTGATGGATGAGAATCTGGGCTTACCGAAAGGATACATCAGGAAGGCACTGAATGGTGGAGAAGAAGACAATGCTTTCTTTGGCACTAAGGTCAGCCACTACCCACCATGCCCCTATCCAGAACTTGTGAACGGACTGCGAGCTCACACTGATGCAGGAGGTGTTATTCTTCTGTTCCAAGATGACAAGGTCGGTGGCCTTCAAATGCTCAAAGATGGGGAATGGCTTGATGTCCAGCCTTTGCCAAATGCCATTGTCATCAACACTGGTGATCAGATTGAGGTCCTGAGCAATGGCAGATACAAGAGTTGTTGGCACAGGGTTCTGGGCTCTACAGATGGGATTAGGAGATCAATTGCATCCTTCTATAACCCACCACTCAAGGCCACCATAAGTCCTGCACCACAATTGgcagaaaaagaaaaccagCAAGTCGATGACACTTATCCTAAATTTGTCTTCGGTGACTACATGTCTGTCTATGCTGAGCAGAAGTTCCTCCCCAAGGAACCAAGATTTAGAGCTGTTAAAGCCATTTGA 927 0.438 MAVPVIDFSKLNGEERAKTMALIANGCEEWGFFQLINHGIPEELLERVKKVSTEFYKLEREENFNNSPTVKLLNDIAEKKSSEKLENVDWEDVITLLDDNEWPENTPSFRETMLEYRSELKKLAESLTEVMDENLGLPKGYIRKALNGGEEDNAFFGTKVSHYPPCPYPELVNGLRAHTDAGGVILLFQDDKVGGLQMLKDGEWLDVQPLPNAIVINTGDQIEVLSNGRYKSCWHRVLGSTDGIRRSIASFYNPPLKATISPAPQLAEKENQQVDDTYPKFVFGDYMSVYAEQKFLPKEPRFRAVKAI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02840 308 Pfam 2OG-Fe(II) oxygenase superfamily 161 254 IPR044861 -
Tsu08g02840 308 Pfam non-haem dioxygenase in morphine synthesis N-terminal 3 100 IPR026992 -
Tsu08g02840 308 SUPERFAMILY Clavaminate synthase-like 2 303 - -
Tsu08g02840 308 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 305 - -
Tsu08g02840 308 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 154 254 IPR005123 -
Tsu08g02840 308 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 5-LIKE 2 305 - -
Tsu08g02840 308 Gene3D - 2 308 IPR027443 -
Tsu08g02840 308 Coils Coil 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02840 Tsu-Chr8 43616642 43618576 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02840 1 271 Glycosyltransferase AT5G59530 32.509 7.50e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02840 K05933 - gmx:100796909 550.436