Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02833 ATGGACGAATTTGGTGTATTGACCCAAAGATTCGGATTGAAACCTCAAGGTAAATCCGCTCCAATGGCTTCCATTAAACGATCATCGCCAAAAACTACTTCCGCTTCTCCACAAAACGGATCTAGATCTCCTCAACATTCACCTTTGGGTTTCAATAACAAAACGCCGCAGACTTCAGGGGATTTTTCCGATGGCATTGACCAGATCTTCGGTGCTGGAATTCCTAAATCAAACGTATCGATTCAGAACGATTCCATTTTCGGTGGCTTCAATCAATCGGTTTCACCGTCGTCGCAggtttatgtagatgatatatTCGGTGGTGTCAATGAAAAAAGTGTCGGTGGTGGTGTTGATGATTTACTCGGTAAAATTGGTGGTTTGCATGCAACGAATGGTAAAAGTTCGATGCACCAAAAATCGCCtaattttgatgatttgatggCTGGGTTTGCTGGTACCAGCATTTCCAATAATGGgaaagcaagcattgggaCGAATAATGCCCAGAAACCAACCGCGACATCTCAAAATGATCCATTTCTAGTATTTGAAACATCTTCAAGCACAGCATCTTCAGAATCATTCCTGGACTCATTAGAGCAAATGAGTAAGAATAGTTCTAAAAGTCCAAGTGGCAGCTCCGGTCCCTCCCCATTATTGAGACCTCCACCGAAGTCAGGGAGTGCAGTTAGCAACTCGCGTATGTCATCAATTGATGAGCTTGAGAACTTTGCCATGGGGCGGGTGCAGAGTAATGCTACTAGAAAGGCAAATACCAACGCTGGTGAGATTAAGCAAAACTCAGCGGCTAAGACAAACAAAGATAAAGGAGCTCCAGCTACAAGAGTGAATCAGTTAAATGGTGCGGATGATCTTGAATCCTTTTTCAGTGCGGGCTTTCGATCAAACAGTGTACCAAAGTCAAGGACTGCAACTATgGATCATATGTTTGATCGCCAAGTAAACAATAATGGAAAACATGAATGGTCACAAAGCATGCCGTCAGCATCCCAAGCCAATGCGAAGACACCTTCACCCATGACATCTTTTGATGATTTGTCATTGATTTTTGGAGGTGAGttgtttaaatttattgatttcTATTACAGTGAAGTGATTTTATTTGTCAACCTAtcattttgtcttttttttgttgcaaaagcTTCCCCATCAACTGAATTCGAGGAAGTGGAAGGTGAAACTGAAGAAAGGAGAAAAGCGAGATTGGGACGTCATCAGAGAACACAAGAGAGAGCGTTGAAAGCAGTAGCTGATATGAACCAGCGTGACCTTCAATCTAAGATGGAGCAAGAAGAGAGACGTCGGATAGCCGACACTGTTGATGTTCAGATAAAGAGGTGGGCTGCAGGGAAAGAAGGCAATATGCGGGCATTGCTGTCATCATTGCAAAATGTTCTTTCGCCAGATTATGGGTGGCAACCAGTGTCTCTGACGGATATGATCACTTCAGCTTCCGTGAAAAAAGTGTATAGAAAAGCGACATTATGTATTCACCCAGATAAAGTCCAGCAGAAAGGTGCTAATCTTGAACAGAAATATACTGCAGAGAAGGTTTTTGACATCCTTAAGGAAGCTTGGACCAAGTTCAATGCAGAAGAGCTTTCCTAA 1632 0.4062 MDEFGVLTQRFGLKPQGKSAPMASIKRSSPKTTSASPQNGSRSPQHSPLGFNNKTPQTSGDFSDGIDQIFGAGIPKSNVSIQNDSIFGGFNQSVSPSSQVYVDDIFGGVNEKSVGGGVDDLLGKIGGLHATNGKSSMHQKSPNFDDLMAGFAGTSISNNGKASIGTNNAQKPTATSQNDPFLVFETSSSTASSESFLDSLEQMSKNSSKSPSGSSGPSPLLRPPPKSGSAVSNSRMSSIDELENFAMGRVQSNATRKANTNAGEIKQNSAAKTNKDKGAPATRVNQLNGADDLESFFSAGFRSNSVPKSRTATMDHMFDRQVNNNGKHEWSQSMPSASQANAKTPSPMTSFDDLSLIFGGELFKFIDFYYSEVILFVNLSFCLFFVAKASPSTEFEEVEGETEERRKARLGRHQRTQERALKAVADMNQRDLQSKMEQEERRRIADTVDVQIKRWAAGKEGNMRALLSSLQNVLSPDYGWQPVSLTDMITSASVKKVYRKATLCIHPDKVQQKGANLEQKYTAEKVFDILKEAWTKFNAEELS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02833 543 MobiDBLite consensus disorder prediction 22 64 - -
Tsu08g02833 543 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 218 - -
Tsu08g02833 543 MobiDBLite consensus disorder prediction 326 345 - -
Tsu08g02833 543 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 218 - -
Tsu08g02833 543 MobiDBLite consensus disorder prediction 1 69 - -
Tsu08g02833 543 MobiDBLite consensus disorder prediction 193 216 - -
Tsu08g02833 543 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 287 365 - -
Tsu08g02833 543 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 387 542 - -
Tsu08g02833 543 MobiDBLite consensus disorder prediction 254 282 - -
Tsu08g02833 543 Gene3D DnaJ domain 413 542 IPR036869 -
Tsu08g02833 543 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 287 365 - -
Tsu08g02833 543 MobiDBLite consensus disorder prediction 399 416 - -
Tsu08g02833 543 MobiDBLite consensus disorder prediction 193 235 - -
Tsu08g02833 543 MobiDBLite consensus disorder prediction 397 416 - -
Tsu08g02833 543 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 387 542 - -
Tsu08g02833 543 SUPERFAMILY Chaperone J-domain 375 540 IPR036869 -
Tsu08g02833 543 MobiDBLite consensus disorder prediction 254 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02833 Tsu-Chr8 43513988 43519982 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02833 - - gmx:100779375 561.607