Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02832 atggttgagAGGATTGGTAGCAAGAATCATAACCAAACACTTGATGTCTCCATTGATCAACAAAGAGATTCTAAGCATTTCGACGATGATGGTCGCGTCAAACGAAccgGAACTGCATGGACGGCAAGTGCACATGTCATAACTGCTGTGATTGGTTCTGGAGTGCTATCTCTAGCTTGGGCTATTGCTCAACTTGGATGGATTGCTGGTCCTATTGTTATGATTCTCTTTGCTTGGGTTACTTACTACACCTCCATTCTTCTTTGTGAATGTTATCGTAACGGCGACCCTATCAATGGCAAGAGAAACTATACTTACATGGATGCTGTTCATTCAAATCTTGGTGGGTTTCAAGTACAATTATGTGGGCTAGTTCAGTATCTTAATCTTGTTGGAGTTGCAATTGGATACACTATAGCATCTGCCATAAGTATGATGGCTATTGAAAGATCAAATTGTTTCCACAGGAGTGGAGGAAAAGATCCATGTCACATGAACAGCAATATTTATATGATTTCATTTGGTTTAGTGCAAATTGTATTCTCTCAAATTCCAGATTTTGATCAACTATGGTGGCTATCTATTTTAGCTGCTATTATGTCCTTTACATACTCCACAATTGGTTTAGGCCTTGGTATTGGAAAAGTTATAGAACACAAAAAGATTGATGGAACCATAACTGGGGTAGATGATGTGACAAAACCTCAAAAAATTTGGGGGAGTTTGCAAGCTCTTGGTGACATAGCCTTTGCCTACTCTTACTCCATGATCCTTATAGAAATTCagGATACGGTAAAAGCACCACCTCCGACGGAGGCGAAAACAATGAAGAAGGCTACAATAATAAGTGTTGTAGTGACAACATTTTTCTACATGCTTTGCGGCTGTTTTGGATATGCCGCGTTTGGAAATTCAAGTCCCGGAAACCTTTTAACCGGTTTTGGATTCTATAACCCATTTTGGCTACTTGACATAGCCAATGCTGCCATAGTTATTCACCTTATTGGTGCATACCAAGTTTACTGTCAACCCCTTTATGCTTTCGTCGAAAATTACACATCAAAAAGATTCCCAAATAGTGATTTTGTGAACAAAACCATAAAAGTTCCAATCCCTGGTTTCCGAGCATACGAACTCAACCTATTTAGATTGGTTTGGAGGACGATTTTTGTGATATTAACAACTTTGGTATCAATGCTCCTTCCGTTTTTCAATGATAttgttggccttcttggtgcGCTCGGATTTTGGCCTCTTACCGTTTATTTTCCAGTGGAGATGTACATAATTCAAAAGAGAATACCGAAGTGGAGCTCGAAATGGATTTGTCTTCAATTGCTTAGTGTTGCTTGTCTTATAATCAGTATAGCTTCTGCAGTTGGTTCTATTGCTGGGATTGTTATTGATCTTAAAGTTTATAAGCCATTCAAGACTATGTATTGA 1443 0.377 MVERIGSKNHNQTLDVSIDQQRDSKHFDDDGRVKRTGTAWTASAHVITAVIGSGVLSLAWAIAQLGWIAGPIVMILFAWVTYYTSILLCECYRNGDPINGKRNYTYMDAVHSNLGGFQVQLCGLVQYLNLVGVAIGYTIASAISMMAIERSNCFHRSGGKDPCHMNSNIYMISFGLVQIVFSQIPDFDQLWWLSILAAIMSFTYSTIGLGLGIGKVIEHKKIDGTITGVDDVTKPQKIWGSLQALGDIAFAYSYSMILIEIQDTVKAPPPTEAKTMKKATIISVVVTTFFYMLCGCFGYAAFGNSSPGNLLTGFGFYNPFWLLDIANAAIVIHLIGAYQVYCQPLYAFVENYTSKRFPNSDFVNKTIKVPIPGFRAYELNLFRLVWRTIFVILTTLVSMLLPFFNDIVGLLGALGFWPLTVYFPVEMYIIQKRIPKWSSKWICLQLLSVACLIISIASAVGSIAGIVIDLKVYKPFKTMY 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02832 480 PANTHER OS05G0424000 PROTEIN-RELATED 12 474 - -
Tsu08g02832 480 Gene3D Amino acid/polyamine transporter I 32 477 - -
Tsu08g02832 480 Pfam Transmembrane amino acid transporter protein 35 467 IPR013057 -
Tsu08g02832 480 PANTHER AMINO ACID CARRIER 12 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02832 Tsu-Chr8 43508588 43511227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02832 8 480 Organic Solute Cotransporters AT1G77380 73.895 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02832 K24917 - gmx:100779910 768.459