Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02831 ATGAGCTTCTTGAGACCATCTGCGATGTACAATTTTGTGTTTACTTATCCTTCATCGCGATGGATGCCGTGTCAGAGTTGGGGATTCCTTCGATGGCCGGGTCTTGAAGGCTTCTTTAGACTTTTGGTGGTTTTCCTTCTTTGGTCTACCTTCTCTCAGCTATGCTTCATACCTTCTTCTTCTATGTACCCTACCCTTCGTGTTGGAGATCGAATTATTGTCGAAAAGGCTTCATATTACATCTGGAATCCTGCTATACATGATATTGTAACATTTCGGGATCCAACACAGcaTTGTGAAGACAACACAgatgtaatttttattaaaagagtTGTTGCAAAAGAAGGCGACAGTGTTGAGGTTCATCATGGAGGACTCTATGTCAATGGTGTCGCTCAAGAGGAGGATTTCGTGGTTGAGCCACCGACATACACAACCAAATTAACCGTGAGACCATTTTGTTTTCAGTTCCGATAA 477 0.4109 MSFLRPSAMYNFVFTYPSSRWMPCQSWGFLRWPGLEGFFRLLVVFLLWSTFSQLCFIPSSSMYPTLRVGDRIIVEKASYYIWNPAIHDIVTFRDPTQHCEDNTDVIFIKRVVAKEGDSVEVHHGGLYVNGVAQEEDFVVEPPTYTTKLTVRPFCFQFR 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02831 158 PRINTS Bacterial leader peptidase 1 (S26A) family signature 107 119 IPR000223 GO:0006508|GO:0008236|GO:0016020
Tsu08g02831 158 PRINTS Bacterial leader peptidase 1 (S26A) family signature 50 66 IPR000223 GO:0006508|GO:0008236|GO:0016020
Tsu08g02831 158 CDD S26_SPase_I 53 113 IPR019533 GO:0004252|GO:0006465
Tsu08g02831 158 PANTHER SIGNAL PEPTIDASE I 1 152 IPR000223 GO:0006508|GO:0008236|GO:0016020
Tsu08g02831 158 TIGRFAM sigpep_I_bact: signal peptidase I 40 140 IPR000223 GO:0006508|GO:0008236|GO:0016020
Tsu08g02831 158 ProSitePatterns Signal peptidases I serine active site. 59 66 IPR019756 GO:0004252|GO:0016021
Tsu08g02831 158 Pfam Signal peptidase, peptidase S26 38 139 IPR019533 GO:0004252|GO:0006465
Tsu08g02831 158 Gene3D Umud Fragment, subunit A 59 154 - -
Tsu08g02831 158 SUPERFAMILY LexA/Signal peptidase 51 146 IPR036286 -
Tsu08g02831 158 PANTHER CHLOROPLAST PROCESSING PEPTIDASE-LIKE 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02831 Tsu-Chr8 43498570 43502619 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02831 K03100 - gmx:100306121 251.906