Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02830 ATGATTGCACAACACTTATGCATACTGTTTCTGTTGTTGCTGGCGTTTCCATTACTATGGGCTACTGAACAAGATTCCACCACCAGCGACAGCATCATCTTCACCACACTTGGCAGAGGTTTCTATGCTTTCGATATCTATTCTCTCCCAATTCACCACCCTTACCATGAATTACAACTCACTGACGGCCACTCCGTCAACTTTAACGGCCAATTCCTTTCCAATCACACACCCACAGACCAAGACTCACCTCCTCTGCAACTCGTTTACGTCACCGAGAGAAACGGTTATCCAACCATATACTACGACGCCGTTTACACAACTACCACAAACAGAATTCAACTTCCTCTGTTACCTAATCATCTCACAGAGGAATCTCAGTCTCAAGTTTCAATCAAAGATAAACCAACTGTAACTACCGACGGTCAATATTTAATCTACGTGTCAACACACGAGAATCCTCGTGTGCCACGTGTAAGCTGGACCGCCGTTTATTCCACTCACCTCATATCAGGTAAAACCCAAAGACTCACTCCTTACGGCGTTGCTGATTTCAGCCCCGCCGTATCTCCCTCCGGAAAATGGACTGCTGTCGCTTCCTACGGCGGCCATGGTTGGTCCGGCGAAGTAGAGGATCTCACTACAGATATCTACGTTTTTCTCACTAAAGACGGAACTCAACGATATAAGGTGGTTGAGCACGGTGGCTGGCCATCTTGGATCGACGATCGGACAATTTACTTTCACCGGAGAGGTAACGACGGTTGGTGGAGTATTTACAGAGTGATTCTTACCGCTGATGATTCTTCTGACTCGGTTATCATCGAACGAGTCACACCACCGGGTTTACACGCTTTCACACCCGCAACCTCACCGGGAAATAACAAATTCATCGCCGTCGCGACGAGAAGACCTGATTCTAGTTTTCGTCATATCGAATTGTTCGATCTTGTTAACAACGAGTTCAAGGAGTTAACTCGTTTCGTCTCGCCTAACGTTCACCATCTCAACCCGTTTATCTCACCCGATTCAACTCGGGTCGGGTACCATAAGTGTAGGGGAAAGGAAAGTAGTAATAGCAGTCCTCAGTTCTTGCTAGAGAATGTTCGGAGCCCTGTTCCAAATTTAACTCTCTTCCGGTTCACCGGTTCCTTTCCGGTTTTCTCACCATCCGGAGACCGAATTGCTTATGTAGAGATGCCTGGAGTTTATGTCATGAACCGGGACGGTTCAAACCGGCGTAAGGTTTCTGACTCGATGGCGTTCTCGTCCGCATGGGACCGGGTTCGACCCGGTGTAATCTATACGGCAGTTGGAGAAACATTTGCTTCGGAGAGCACACAGGTTGATATCGTATCAATTGATGTTGACCGGAACATCGTCAAAAAGTTGACCCATGACGGAAAGAACAATGCATTTCCGTCACAATCGCCCGACGGAAAATGGATTGTGTTCCGTTCGGGTCGAACGGGTCATAAGAATCTTTACATAATGGATTCTGTTGGCGGAGAGAAAAGCGGACTTAGAAGGTTAACCGAGGGTGCATGGACGGATACAATGTGCAATTGGTCCCCTGATGGAGAATGGATCGCTTTTGCATCAGATCGTCATGACCCGGGTAGTGGAAGTTTCGAGATTTACCTAATCCACCCGAATGGAACCGGGTTGAGGAAACTGATTCAAAGTGGATCGGGTGGTAGAACGAATCATCCGTATTTTAGTCCCGATGGAAAGAGTATTGTGTTTACGTCAGACTATGCAGGTATATCAGCTGAACCAATTTCAAACCCGCATGCTTACCAACCTTACGGTGAAATTTTCACCGTTAGGTTGGATGGTTCGGGTTTGACGAGATTGACGCATAATTCATATGAAGACGGAACGCCTGCTTGGTCACCCAAATATATCAAGCCAGTAAATGTTGAGAGGCCTAAGGGTGGACCTTATTGTTCTTTTGATGATCCTCATTGGCTCGACAACATGCCAAATTACATTGTCAGTAGTACAGGGCTACATGCACAATGTGGTTTGCATCTTAACTCCCCGTGTTTCACGCACGCAGAGTCTGGGAATAGCAGAAAGATGACTTTATCAAGCATCTATGCAGACATGGCCACAATTCAGTCATCAAAGGCAGACAAACATCCAATTCCAAAGATCAATTCTTCAGACATAACACAACCAAAAGATAGCATAGCATAA 2202 0.4632 MIAQHLCILFLLLLAFPLLWATEQDSTTSDSIIFTTLGRGFYAFDIYSLPIHHPYHELQLTDGHSVNFNGQFLSNHTPTDQDSPPLQLVYVTERNGYPTIYYDAVYTTTTNRIQLPLLPNHLTEESQSQVSIKDKPTVTTDGQYLIYVSTHENPRVPRVSWTAVYSTHLISGKTQRLTPYGVADFSPAVSPSGKWTAVASYGGHGWSGEVEDLTTDIYVFLTKDGTQRYKVVEHGGWPSWIDDRTIYFHRRGNDGWWSIYRVILTADDSSDSVIIERVTPPGLHAFTPATSPGNNKFIAVATRRPDSSFRHIELFDLVNNEFKELTRFVSPNVHHLNPFISPDSTRVGYHKCRGKESSNSSPQFLLENVRSPVPNLTLFRFTGSFPVFSPSGDRIAYVEMPGVYVMNRDGSNRRKVSDSMAFSSAWDRVRPGVIYTAVGETFASESTQVDIVSIDVDRNIVKKLTHDGKNNAFPSQSPDGKWIVFRSGRTGHKNLYIMDSVGGEKSGLRRLTEGAWTDTMCNWSPDGEWIAFASDRHDPGSGSFEIYLIHPNGTGLRKLIQSGSGGRTNHPYFSPDGKSIVFTSDYAGISAEPISNPHAYQPYGEIFTVRLDGSGLTRLTHNSYEDGTPAWSPKYIKPVNVERPKGGPYCSFDDPHWLDNMPNYIVSSTGLHAQCGLHLNSPCFTHAESGNSRKMTLSSIYADMATIQSSKADKHPIPKINSSDITQPKDSIA 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02830 733 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 29 654 - -
Tsu08g02830 733 Pfam WD40-like Beta Propeller Repeat 462 497 IPR011659 -
Tsu08g02830 733 Pfam WD40-like Beta Propeller Repeat 568 585 IPR011659 -
Tsu08g02830 733 Pfam WD40-like Beta Propeller Repeat 523 547 IPR011659 -
Tsu08g02830 733 SUPERFAMILY DPP6 N-terminal domain-like 136 418 - -
Tsu08g02830 733 Gene3D - 120 370 IPR011042 -
Tsu08g02830 733 MobiDBLite consensus disorder prediction 712 733 - -
Tsu08g02830 733 Gene3D - 386 541 IPR011042 -
Tsu08g02830 733 Gene3D - 542 660 IPR011042 -
Tsu08g02830 733 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 29 654 - -
Tsu08g02830 733 SUPERFAMILY Tricorn protease N-terminal domain 384 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02830 Tsu-Chr8 43494630 43498008 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02830 - - mtr:MTR_3g088425 1202.96