Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02815 ATGAAGAGAAAAAGATCCCCCAAATCGCTTCCTCCTCCACCATCAACCCCTCCAAcaccccaaacccaaacccgccACTCCACCAACGTCTCTAAATCTCGGGTATGGATCCCTCTAAACTTAACCCGACAAGAACTCTCACTACCCCTCACATTCCCCACCGGCCAAACCTTCCGTTGGAAAAACACTGCCCCTTCTCAATACACCGGCGTTGTCGGTCCCCACCTCGTATCCCTCAAACAACTCCAAAACGGCGACGTATGCTACTCCCTTCACACCCAATCCGGCGATGCCAAATCGGCATTGCTTGATTTCTTGAACGCGGATGTTTCTCTCGCTGATACGTGGAAGGTTTTCTCTGCTTCCGATGAACGATTTGCGGAACTGGCGCAACATTTGAGTGGTGCTAGGGTTTTGAGACAAGATCCTTTTGAATGTTTGATTCAATTTATGTGTTCTTCTAATAATCATATTAGTAGAATCACTAAAATGGTTGAATATGTTTCGTCTCTTGGGACTTATTTAGGTCATGTTGAAGGCTTTGATTTTCATGCTTTTCCTACTCTTCAACAGCTTTCATTGGTCTCTGAACAACAACTCAGAAACGCTGGTTTTGGTTACAGGGCTAAGTATATAGTTGGCACGGTAAATGCTTTGCAATCGAATCTTGAAGGTGGGGAAGAATGGCTTCGTTCTCTTCGAAAATTGGAGCTTCAAGATGTTATATCTGAGCTTTCAAAGTTACCTGGAGTGGGTCCGAAAGTGGCTGCTTGTATAGCTCTATACTCGCTTGATCAACACCATGCTATTCCTGTTGACGTTCATGTGTGGCGAATTGCTCAAAAGTATCTCTTACCCGAGCTTGCAGGTTCCAAGTTGACACTGAAGCTTTGCAATCGTGTTGCAGAGGCTTTTGTGACAAAATATGGTAAATATGCCGGTTGGGCTCAAGCTGTTTTATTTATTGCTGAGTTGCCTTCACAAAAGGCCCTTCTACCTTCACATTTGAAAACTACCAAACAGCAGACTCCCACAAAGAGAGAAAACCGTGAAGAAGCTGAGTGA 1065 0.4357 MKRKRSPKSLPPPPSTPPTPQTQTRHSTNVSKSRVWIPLNLTRQELSLPLTFPTGQTFRWKNTAPSQYTGVVGPHLVSLKQLQNGDVCYSLHTQSGDAKSALLDFLNADVSLADTWKVFSASDERFAELAQHLSGARVLRQDPFECLIQFMCSSNNHISRITKMVEYVSSLGTYLGHVEGFDFHAFPTLQQLSLVSEQQLRNAGFGYRAKYIVGTVNALQSNLEGGEEWLRSLRKLELQDVISELSKLPGVGPKVAACIALYSLDQHHAIPVDVHVWRIAQKYLLPELAGSKLTLKLCNRVAEAFVTKYGKYAGWAQAVLFIAELPSQKALLPSHLKTTKQQTPTKRENREEAE 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02815 354 SUPERFAMILY DNA-glycosylase 142 323 IPR011257 GO:0003824|GO:0006281
Tsu08g02815 354 MobiDBLite consensus disorder prediction 1 30 - -
Tsu08g02815 354 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 35 345 - -
Tsu08g02815 354 MobiDBLite consensus disorder prediction 333 354 - -
Tsu08g02815 354 Gene3D - 22 106 - -
Tsu08g02815 354 SMART endo3end 152 324 IPR003265 GO:0006284
Tsu08g02815 354 Pfam HhH-GPD superfamily base excision DNA repair protein 148 283 IPR003265 GO:0006284
Tsu08g02815 354 SUPERFAMILY TATA-box binding protein-like 27 141 - -
Tsu08g02815 354 CDD ENDO3c 144 322 IPR003265 GO:0006284
Tsu08g02815 354 Gene3D Hypothetical protein; domain 2 142 266 - -
Tsu08g02815 354 Gene3D - 116 325 IPR023170 -
Tsu08g02815 354 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 39 147 IPR012904 GO:0003684|GO:0006289|GO:0008534
Tsu08g02815 354 PANTHER N-GLYCOSYLASE/DNA LYASE 35 345 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02815 K03660 - gmx:100789749 534.258