Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02813 ATGGGAGAGTGGTGGTGGCGGTGTTCTTTTATATTACTTTCAGTGATTTTAACAGCATCTCTTGGCACCATCCATGGTGGCAATGTCACCTACGACAGAACATCATTAGTCATTAATGGCCAACATAAAATCCTCTTCTCCGGTTCAATTCACTATCCTCGTAGCACTCCTCAGATGTGGCCTAACTTAATTGCCAAAGCCAAGGAAGGGGGATTAGATGTCATACAAACTTATGTATTTTGGAATCTTCATGAGCCTCATCAAGGCCAGTATGAGTTTAGTGGAAGGTTTGATTTAGTTGGATTCATTAAAGAAATTCAAGCACAAGGTTTATATGTGACACTTAGAATTGGACCTTACATTGAGAGTGAATGCACTTATGGGGGTCTACCATTATGGTTACATGATATTCCAGGAATTGTATTTAGATCTGATAATGATCAATTCAAGTTTCACATGCAAAGATTCACAACCAAAATAGTCAACCTAATGAAATCAGCCAATCTTTTTGCTTCACAAGGAGGGCCTATTATACTATCTCAGattgaaaatgaatatGGTAATGTTGAAATGGGGTTTCAAGAGAAAGGATTGAGCTATGTTCGTTGGGCGGCTCAAATGGCCGTTGGACTCCAAACGGGTGTGCCTTGGGTAATGTGTAAACAAGATGATGCTCCTGATCCTGTGATCAACGCATGCAATGGCATGCAATGCGGGAAAACCTTTAAGGGGCCAAACTCGCCTAACAAGCCTTCATTATGGACAGAGAATTGGACTAGTTTttatcAAGCCTTTGGTGGAGTACCATACCTGAGATCAGCTTCAGATATCGCCTACAATGTTGCCTTGTTCATTATTGCAAAGAAAGGAAGCTATGTCAATTACTACATGTACCATGGAGGAACCAATTTTGATAGATTGGCCTCCCCTTTCATAACAACAGCTTATTATGACGAGGCTCCACTAGATGAATATGGTTTAATAAGGCAACCAAAATGGGGACATCTTAAGGAGCTACATGCTGCAATCAAGTCATGTTCACAACCTCTACTTTATGGAACTCAAACCACATTCATCTTAGGCTTACAACAAAAAGCTTATGTTTTCAGAAGCTCCACACAATGTGCTTCCTTCTTGGAAAATAGTGGACCTAGGGATGTCACAATCCAATTTCTAAATATTCCGTATCAATTGCCCCGAAAATCAATCAGTATTCTACCAGGCTGCAAGAATGTAGCATTCAATACTGGCAAGGTGATTATACAGAACAGTGTCAGAGAAATGAAACCACAGTTACGGTTTAATTCAGCTGAAAAATGGAAAGTGTATACAGAAGCCATCCCTAATTTTGATGATACGTCATTAAGAGCAAACAGATTATTAGATCAAATTGGCACAGCAAAAGATATATCTGATTACATGTGGTACACTTTCAGGCTTAATGACAACTCTCCTACTGCTCAATCTGTTCTTAGTATATACAGCCTAGGACATGTTTTGCATTCGTTCGTCAATGGAGTTTTAACAGGTTCTGCGCATGGAAATCACGACAATATGTTTGTTGCAACGGAACACAATGTTAATCTGGTAAATGGGATGAACAACATCTCCATACTAAGTGCGACAGTTGGATTGCCGAACTCGGGAGCATATTTAGAGCGCAGAGTTGCTGGTTTGCGTAAAGTGAAAGTTCAAGGAAGAGATTTCACTAATTACTCGTGGGGATATCAGGTTGGGTTGTTGGGAGAAAAATTGCAAATCTATACAGTCAGTGGATCAAGTAAAGTTCAGTGGGAGAGTTTTCAAAGCTCTACTAAACCACTAACATGGTATAAGACCACATTTGATGCACCAGAAGGCAACAATCCTGTAGTGCTTAACCTTGGTTCCATGGGAAAGGGACTTGCTTGGGTTAATGGCCAAGGTATTGGTCGATATTGGATATCTTTCCACACACCAAAGGGGACTCCTTCTCAACAATGGTATCACATACCTCGTTCCTTCCTAAAACCTACCGGGAATCTACTCGTTATACTAGAAGAAGAAACTGGAAATCCTTTAGGAATCACTCTAGACACAGTATACATCACGAATTGA 2097 0.4001 MGEWWWRCSFILLSVILTASLGTIHGGNVTYDRTSLVINGQHKILFSGSIHYPRSTPQMWPNLIAKAKEGGLDVIQTYVFWNLHEPHQGQYEFSGRFDLVGFIKEIQAQGLYVTLRIGPYIESECTYGGLPLWLHDIPGIVFRSDNDQFKFHMQRFTTKIVNLMKSANLFASQGGPIILSQIENEYGNVEMGFQEKGLSYVRWAAQMAVGLQTGVPWVMCKQDDAPDPVINACNGMQCGKTFKGPNSPNKPSLWTENWTSFYQAFGGVPYLRSASDIAYNVALFIIAKKGSYVNYYMYHGGTNFDRLASPFITTAYYDEAPLDEYGLIRQPKWGHLKELHAAIKSCSQPLLYGTQTTFILGLQQKAYVFRSSTQCASFLENSGPRDVTIQFLNIPYQLPRKSISILPGCKNVAFNTGKVIIQNSVREMKPQLRFNSAEKWKVYTEAIPNFDDTSLRANRLLDQIGTAKDISDYMWYTFRLNDNSPTAQSVLSIYSLGHVLHSFVNGVLTGSAHGNHDNMFVATEHNVNLVNGMNNISILSATVGLPNSGAYLERRVAGLRKVKVQGRDFTNYSWGYQVGLLGEKLQIYTVSGSSKVQWESFQSSTKPLTWYKTTFDAPEGNNPVVLNLGSMGKGLAWVNGQGIGRYWISFHTPKGTPSQQWYHIPRSFLKPTGNLLVILEEETGNPLGITLDTVYITN 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02813 698 SUPERFAMILY Galactose-binding domain-like 403 559 IPR008979 -
Tsu08g02813 698 Gene3D - 572 696 - -
Tsu08g02813 698 SUPERFAMILY (Trans)glycosidases 25 346 IPR017853 -
Tsu08g02813 698 Pfam Glycosyl hydrolases family 35 35 342 IPR031330 -
Tsu08g02813 698 SUPERFAMILY Galactose-binding domain-like 572 695 IPR008979 -
Tsu08g02813 698 Gene3D - 438 571 - -
Tsu08g02813 698 PANTHER BETA-GALACTOSIDASE 10 697 - -
Tsu08g02813 698 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Tsu08g02813 698 PRINTS Glycosyl hydrolase family 35 signature 633 649 IPR001944 GO:0004553|GO:0005975
Tsu08g02813 698 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Tsu08g02813 698 PRINTS Glycosyl hydrolase family 35 signature 606 620 IPR001944 GO:0004553|GO:0005975
Tsu08g02813 698 PRINTS Glycosyl hydrolase family 35 signature 310 326 IPR001944 GO:0004553|GO:0005975
Tsu08g02813 698 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Tsu08g02813 698 PRINTS Glycosyl hydrolase family 35 signature 253 268 IPR001944 GO:0004553|GO:0005975
Tsu08g02813 698 PRINTS Glycosyl hydrolase family 35 signature 291 306 IPR001944 GO:0004553|GO:0005975
Tsu08g02813 698 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Tsu08g02813 698 PANTHER BETA-GALACTOSIDASE RELATED 10 697 IPR001944 GO:0004553|GO:0005975
Tsu08g02813 698 Gene3D Glycosidases 24 347 - -
Tsu08g02813 698 Pfam Beta-sandwich domain in beta galactosidase 350 419 IPR041392 -
Tsu08g02813 698 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02813 Tsu-Chr8 43328185 43336322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02813 8 697 Glycoside Hydrolase AT5G63800 59.084 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02813 - - gmx:100789220 1189.1