Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02808 ATGGCTTCTTCAACAATTCCAAACGTATCCTTAACATTCAATTGCCAAACCTTCGTTGATAACAAACCGCCATTACCGAACTATTTGAGCTTCTCTTCATCGAAGCGTCCACGACCTCCATGTCTTTTCACTGTCAGAGCAAGCGATACGGATTTTGAAGCCGCCGTTGTTGCCGGTAATGTGCCGGAGGCACCTCCTGTACCGCCTATACCTTCTGCACCAGCGGGAACACCGGTGGTTCCTTCACTTcCAATTCAGCGGCGTCCTCGTCGGAATCGAAGGTCGCCTGTACTTCGATCGGCGTTTCAGGAAACGAGTTTATCACCTGCTAATTTTGTGTATCCACTTTTTATACATgaagGTGAGGAGGACACCCCAATTGGGGCTATGCCTGGATGCTACAGGCTTGGTTGGAGACATGGACTTGTGGAAGAGGTTGCAAAAGCACGGGATGTTGGTGTTAACAGTGTTGTGCTCTTCCCCAAAATTCCAGATGCTTTGAAGTCTCCCACAGGTGATGAAGCATACAATGAGAATGGTTTAGTTCCTCGGACTATACGGTTACTCAAGGATAAGTACCCAGATCTTATTATTTATACAGATGTTGCATTAGATCCTTATTCATCAGATGGACATGATGGCATAGTCAGAGAAGATGGAGTTATTATGAATGATGAGACTGTTCATCAGCTTTGTAAACAAGCTGTAGCCCAGgcCCGAGCTGGAGCAGATGTTGTCAGCCCCAGTGATATGATGGATGGCCGGGTAGGAGCAATGCGATTAGCTCTTGATGCAGAAGGCTTTCAGCACGTTTCTATAATGTCATATACAGCAAAGTATGCAAGTTCATTTTATGGCCCATTTAGAGAAGCATTGGACTCAAACCCCCGGTTCGGAGACAAGAAGACCTATCAGATGAATCCAGCAAATTACAGAGAGGCTTTGACTGAGATGAGGGAAGATGAATCTGAAGGAGCTGACATTCTCTTGGTGAAGCCTGGTCTTCCTTATTTGGATATCATAAGGCTGCTTAGGGATAATTCTCCTCTACCAATTGCAGCATACCAGGTTTCTGGTGAATACTCGATGATAAAAGCTGGCGGTGCTCTGAAAATGATTGATGAAGAAAAGGTTATGATGGAGTCATTATTGTGCCTCCGACGGGCAGGTGCTGACATCATCCTTACATATTTTGCTCTACAAGCTGCCAGAAGTTTGTGTGGAGAGAAGAGAATAATTAGTACTGTATAA 1251 0.4476 MASSTIPNVSLTFNCQTFVDNKPPLPNYLSFSSSKRPRPPCLFTVRASDTDFEAAVVAGNVPEAPPVPPIPSAPAGTPVVPSLPIQRRPRRNRRSPVLRSAFQETSLSPANFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVEEVAKARDVGVNSVVLFPKIPDALKSPTGDEAYNENGLVPRTIRLLKDKYPDLIIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQARAGADVVSPSDMMDGRVGAMRLALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALTEMREDESEGADILLVKPGLPYLDIIRLLRDNSPLPIAAYQVSGEYSMIKAGGALKMIDEEKVMMESLLCLRRAGADIILTYFALQAARSLCGEKRIISTV 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02808 416 SMART ALAD_2 84 406 IPR001731 GO:0004655|GO:0033014|GO:0046872
Tsu08g02808 416 PRINTS Delta-aminolevulinic acid dehydratase signature 350 365 IPR001731 GO:0004655|GO:0033014|GO:0046872
Tsu08g02808 416 PRINTS Delta-aminolevulinic acid dehydratase signature 273 292 IPR001731 GO:0004655|GO:0033014|GO:0046872
Tsu08g02808 416 PRINTS Delta-aminolevulinic acid dehydratase signature 235 254 IPR001731 GO:0004655|GO:0033014|GO:0046872
Tsu08g02808 416 PRINTS Delta-aminolevulinic acid dehydratase signature 325 341 IPR001731 GO:0004655|GO:0033014|GO:0046872
Tsu08g02808 416 PRINTS Delta-aminolevulinic acid dehydratase signature 380 399 IPR001731 GO:0004655|GO:0033014|GO:0046872
Tsu08g02808 416 PRINTS Delta-aminolevulinic acid dehydratase signature 204 218 IPR001731 GO:0004655|GO:0033014|GO:0046872
Tsu08g02808 416 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 68 411 IPR001731 GO:0004655|GO:0033014|GO:0046872
Tsu08g02808 416 ProSitePatterns Delta-aminolevulinic acid dehydratase active site. 325 337 IPR030656 -
Tsu08g02808 416 CDD ALAD_PBGS_aspartate_rich 95 407 - -
Tsu08g02808 416 SUPERFAMILY Aldolase 82 406 - -
Tsu08g02808 416 MobiDBLite consensus disorder prediction 69 95 - -
Tsu08g02808 416 Gene3D Aldolase class I 77 416 IPR013785 -
Tsu08g02808 416 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 2, CHLOROPLASTIC-RELATED 68 411 - -
Tsu08g02808 416 Pfam Delta-aminolevulinic acid dehydratase 87 404 IPR001731 GO:0004655|GO:0033014|GO:0046872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02808 K01698 - gmx:548095 684.1