Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02784 atgaaactcgACATTGAACACTCGATTACGCGTTTAGCCTACTTGAAAGCAAGGATTGAAGGCTCGTTAGTCTCTAATAATGGTTATAGATCATCTCTTTCTCCGTCATTAACCGGTAGAACCATACTAGCCAATCTCTCAATAGGCCAACCTCCCATCCCACAATTACTCATCATGGACACTGCAAGTCACATCTTTTGGACAATGTGCACCCCCTGTACAAGTTGTAACCACTATCTAGGTCAACTTTTCGATCCTTCAAAATCTTCTACCTATTCTCCATCATGCAGAGAACCATGTTACTTTGACAACTGCGAATGCAACCTCACCAATCAGAGGACATACAGCATCAGTTACGCAGACAAATCCTTCTCATCAGGAACAGTTGGAAGTGACACAATAGTCTTTGAGACGGATGACGAAGGTATCACCCGCGTAAACAAGATAGAATTTGGGTGTGCTCATGACATTATATATAATCCGGATCCAGGGTACAATGGAGTACTAGGGTTAGGATTAAATAGTGGACGTTTGTCTTTGGCAGCACAAATAGGTAAAACATTCTCTTACTGTATAGGTAGCTTAGCCGATAAGCATTATAATTACAACCAATTAATATTAGGTGAAGGAGCAAATCTTGAAGGTTATACTACACATTTTGAAGTGCATTATGGATTAAACTATGTAACCATGGAAGGCGTAAGTGTAGGAGAAAAGAGTCTTGACATAGTTCCAAGTACTTTTCAGATCAAGGAGAATGGCACAGGTGGAGTTATCATTGACACAGGAAGTACattctctttttttgttgatgatgtgtATAAATTACTATATAATGAAATTCAAAACCTTTTTCAAGGGTCTCTTCGACAAGCTAGAATACCAAAATTTCCATGGATGCTTTGTTACTTTGGGAGTGTAAGTAGGGACCTGATAGGGTTTCCAGTGGTTACATTTCAATTTGCTGGAGGAGCAGATTTAGTGTTAGATTCATTAAGCTTTTTTCAACAAATGGGGGATCATGTGTTTTGTATGGCTGTAAGTCCAATTAGTGAGATTGGCATGGATGTTTCAGTTATTGGGTTATTAGCTCAACAGAGTTACAATGTGGGATATGACCAAGTTAATGGACTTATTTACTTCCAAAGAATTGATTGTGAACTTCTCAGTAGCTGA 1176 0.3784 MKLDIEHSITRLAYLKARIEGSLVSNNGYRSSLSPSLTGRTILANLSIGQPPIPQLLIMDTASHIFWTMCTPCTSCNHYLGQLFDPSKSSTYSPSCREPCYFDNCECNLTNQRTYSISYADKSFSSGTVGSDTIVFETDDEGITRVNKIEFGCAHDIIYNPDPGYNGVLGLGLNSGRLSLAAQIGKTFSYCIGSLADKHYNYNQLILGEGANLEGYTTHFEVHYGLNYVTMEGVSVGEKSLDIVPSTFQIKENGTGGVIIDTGSTFSFFVDDVYKLLYNEIQNLFQGSLRQARIPKFPWMLCYFGSVSRDLIGFPVVTFQFAGGADLVLDSLSFFQQMGDHVFCMAVSPISEIGMDVSVIGLLAQQSYNVGYDQVNGLIYFQRIDCELLSS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02784 391 SUPERFAMILY Acid proteases 43 386 IPR021109 -
Tsu08g02784 391 PANTHER OS07G0603500 PROTEIN-RELATED 5 388 - -
Tsu08g02784 391 Pfam Xylanase inhibitor N-terminal 44 208 IPR032861 -
Tsu08g02784 391 ProSiteProfiles Peptidase family A1 domain profile. 42 382 IPR033121 -
Tsu08g02784 391 CDD pepsin_A_like_plant 43 386 IPR034161 -
Tsu08g02784 391 Pfam Xylanase inhibitor C-terminal 228 382 IPR032799 -
Tsu08g02784 391 Gene3D Acid Proteases 32 208 IPR021109 -
Tsu08g02784 391 Gene3D Acid Proteases 212 390 IPR021109 -
Tsu08g02784 391 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 5 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02784 Tsu-Chr8 42793381 42794913 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02784 46 389 Miscellaneous Gene Families AT1G44130 23.577 3.46e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02784 - - lang:109327872 517.309