Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02694 ATGGCAAAGTCAATAGTAGATTTCACAGTACAAAAAATCAGTGATTTACTCATTGATGAAGCTGTGTTCTTATATGGAGTAAAAGACAAAGTGCAGAATCTTAAAACTGAGTTAAGGATGATGGAATTGTACTTACAAGATGCAGACAGAAAgcaagaagaaaatgaaagtcTAAAGAATTGGATTTCAGAAATAAGAGAAGCAGCTTATGATTCTGATGATGTAATTGAAGGATATGTCTTAAAAAGTGCTTCTAGAAGAAACAATATGACAGGTACCTTAAACAGAATCAAAAGTTATGTTTCAATTATCAATAGGTTAATAGAAATTCATCGAGTCGGTTATAAagttgatgatatcatttctagGATAAATAGTCTTACAAGAAGCTTAGAAACTTTTGGCATAAAAAGTGAAAGTGGAGAAGCTTCAAATTCAATACATGGGAGAAACAAAGCTTTGAGAAGATCTTATTCTCATGTTATTGAAGAAGACATCATTGGTGTTGAAGATAATGTTAAGATTTTGGAGTCATGTTTGgttaataacaacaataatggATACAAAATTGTTGCTATTTGGGGTATGGGAGGTTTAGGAAAAACAACATTGGCTAAGAAAGTTTATCATAGTACTAACGTTAGGCAAAGTTTTGAGAGCTTAGCTTGGGCTTATATATCACAACATTGTCAAGCAAGGGATGTTTGGGAAGGGATTTTGTTAAAACTTTTATCGCCTTCTAAGGAGTTACGCGAAGAACTTGTGAATATGCGAGATGAGGAGGTTGCGAAAAAGCTTTATCGAGTTCAAGTGGAGAAGAAGTGTTTGGTAGTTCTTGATGATATTTGGAGTGTTGGTACTTGGAATAATTTGAGTCCTGGTTTTCCAACCGGGATATCTTCGTCTGTTGTTGGTAGTAAAATATTGCTTACTACTAGGAATAATGATGTTGCATTGTTTATGGATCCTAATTGTTATCTTCATGAACCAAGGTGTTTGGATGAAGATGATAGTTGGGAGTTGTTTCAGAAAAAGGCTTTTCCAAAATATGATGATCCAGACTCAAGAATCAGCACAGAAATGGAGAAATTGGGAAGGGAAATGGTTGGAAGATGTGGAGGTTTACCTCTAGCCATAATAGTCCTTGGAGGATTATTAGCATCAAAGCCAACATTCTATGAATGGGACACAGTGAGACAGAACATCAATTCATACCTAAGAAAAGCAAAAGGTAAAGAACAACATTTAGGAGTATCAGAAGTACTAGCTTTAAGCTATTATGAATTACCCTACCAATTGAAACCATGTTTCCTACATTTAGCACATTTCCCTGAAAACCAAGAGATACAAACAAAGAAACTAACAAGAACATGGGTGGCAGAAGGTATCATATCACTACTCCAAAACGCCGGAGACGGCGAGGAAGCTCTTGAGGATGTGGCGCAACGTTACTTGACGGAACTCGTTGAAAGGTGTATGATTCAGGTAGTTGAAAAGAGTTCAACAGGAAGAATTAGAACAGTCCAAATGCATAACCTCATGAGGGACTTATGTGTGTCTAAGGCATATCAAGAAAACTTTCTTGACATGATTGATTCGCGGAATGTGGACCAAACTAGTACCTCGAAAGTGAGGCCAACCGGTGAAGTTCGAAGAATCGCATTATATCTTGATCAAGATGTTGATAGTTTCTTGCTTAACAAGTTAAAAAGCCACAAACATCTTAGGTCTATTCTTTGCTACCATGATAAAACAGCTAGATTAAGTGAATGGAGATTGATGAAATCGGTTTTCAAAAAATGCAAGTTACTTAGGGTTTTGAATTTGGAAGGAATTCAATGTCAAATGGGAAAATTACCTAAAGAAATTGGTTACTTAATCCATTTAAGGTTTCTAAGTCtaagaaacacaaaaattgaTGAGTTGCCAAATTCAATAGGAAATTTAAAGTGCTTACAAACCTTAGATCTTCTCACAGGAAACTCGACCGTTCAAATACCGAATGTCATAACAAACATGGAAAAGTTGAGACATTTATATCTACCTGAATCATGTGGCAACGACGTTGAGAAATGGCAACTATCCAATCTGAAAAACTTGCAAACTTTGGTTAATTTTCCTGCAGAGAAATGTGATGTAAAAGATCTCATGAAACTAACCAATTTAAGAAAATTGGTAATAGATGATCCTAACTATGGAGAAATCTTCAAAAGTACTAATATAACCTTTAACCATCTTGAGTCATTGTTTTATGTTAGTTCCGAGGAAATCTCAATTCTAGAAGTTTCTGCAGGATGTCCTAATCTATACAAGCTTCACATTGAAGGACCTATAAGTAATTTCCCTCAACCAAACcaaatttcatcaaaacttGCTAAACTTAAATTACAAGGTTCTGGTCTTATTGTTGATCCAATGACAACATTAGAGAAACTTCCAAATTTAAGGTTACTTGAGTTACAACTTGATTCATTTTTAGGGAAGAAAATGGTTTGTTCTAGCAATGGTTTTCCTCAGTTAAGGTCACTTGTTTTGAGTGATTTGTCTAATCTTGAAGTGTGGAAATTGGAGAAAGGTGCTATGGCTTATCTTAGTAAACTTGAGATTTCTAATTGTACCAAGCTTGAGGTTGTTCCTGAAGGGATTAGGTTTGTGATTAGTCTTAAGGATTTAGAGATTAGATCAATGTTTGCAGCATTTAGAATCAAACTTGAAAAAGGTGGTGATGAACATTACAAAGTTCAACATGTTCCATCTTTGGTTTTTCGTTATTGTGATTATTAG 2784 0.3398 MAKSIVDFTVQKISDLLIDEAVFLYGVKDKVQNLKTELRMMELYLQDADRKQEENESLKNWISEIREAAYDSDDVIEGYVLKSASRRNNMTGTLNRIKSYVSIINRLIEIHRVGYKVDDIISRINSLTRSLETFGIKSESGEASNSIHGRNKALRRSYSHVIEEDIIGVEDNVKILESCLVNNNNNGYKIVAIWGMGGLGKTTLAKKVYHSTNVRQSFESLAWAYISQHCQARDVWEGILLKLLSPSKELREELVNMRDEEVAKKLYRVQVEKKCLVVLDDIWSVGTWNNLSPGFPTGISSSVVGSKILLTTRNNDVALFMDPNCYLHEPRCLDEDDSWELFQKKAFPKYDDPDSRISTEMEKLGREMVGRCGGLPLAIIVLGGLLASKPTFYEWDTVRQNINSYLRKAKGKEQHLGVSEVLALSYYELPYQLKPCFLHLAHFPENQEIQTKKLTRTWVAEGIISLLQNAGDGEEALEDVAQRYLTELVERCMIQVVEKSSTGRIRTVQMHNLMRDLCVSKAYQENFLDMIDSRNVDQTSTSKVRPTGEVRRIALYLDQDVDSFLLNKLKSHKHLRSILCYHDKTARLSEWRLMKSVFKKCKLLRVLNLEGIQCQMGKLPKEIGYLIHLRFLSLRNTKIDELPNSIGNLKCLQTLDLLTGNSTVQIPNVITNMEKLRHLYLPESCGNDVEKWQLSNLKNLQTLVNFPAEKCDVKDLMKLTNLRKLVIDDPNYGEIFKSTNITFNHLESLFYVSSEEISILEVSAGCPNLYKLHIEGPISNFPQPNQISSKLAKLKLQGSGLIVDPMTTLEKLPNLRLLELQLDSFLGKKMVCSSNGFPQLRSLVLSDLSNLEVWKLEKGAMAYLSKLEISNCTKLEVVPEGIRFVISLKDLEIRSMFAAFRIKLEKGGDEHYKVQHVPSLVFRYCDY 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02694 927 Pfam Rx N-terminal domain 6 88 IPR041118 -
Tsu08g02694 927 Gene3D Ribonuclease Inhibitor 558 707 IPR032675 -
Tsu08g02694 927 SUPERFAMILY L domain-like 509 895 - -
Tsu08g02694 927 Gene3D - 152 325 IPR027417 -
Tsu08g02694 927 PANTHER OS09G0479500 PROTEIN 17 912 - -
Tsu08g02694 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 440 IPR027417 -
Tsu08g02694 927 CDD RX-CC_like 2 129 IPR038005 -
Tsu08g02694 927 Gene3D Ribonuclease Inhibitor 708 898 IPR032675 -
Tsu08g02694 927 Gene3D - 332 424 IPR042197 -
Tsu08g02694 927 PRINTS Disease resistance protein signature 269 283 - -
Tsu08g02694 927 PRINTS Disease resistance protein signature 859 875 - -
Tsu08g02694 927 PRINTS Disease resistance protein signature 372 386 - -
Tsu08g02694 927 PRINTS Disease resistance protein signature 190 205 - -
Tsu08g02694 927 Gene3D - 5 114 - -
Tsu08g02694 927 Coils Coil 31 51 - -
Tsu08g02694 927 Pfam NB-ARC domain 170 426 IPR002182 GO:0043531
Tsu08g02694 927 PANTHER DISEASE RESISTANCE PROTEIN RP 17 912 IPR044974 GO:0006952
Tsu08g02694 927 Gene3D - 425 522 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02694 Tsu-Chr8 41110343 41114752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02694 608 828 Receptor kinase-like Gene Family AT3G23110 30.736 4.65e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02694 - - gmx:100305356 1343.56