Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02690 ATGGCTGTATCTGCAAGAATCAATGTGACAGTGATGATGGTGATGGTAGCTTTAGCAATCTCTCTTTATTGGGATTCAGCTTCAGCTTCATCTGTAGGTGAATTTGTTGATAAGACCATTAATTCTCACACGATCGTCATCTTTTCCAAGACCTATTGTCCGTATTGTAGAAGAGCAAAAGCTGTTTTCAAAGAGTTGAACCAAGTGCCACATGTTGTGGAGCTTGATGAGAGAGATGATGGTTCGAAGATTCAGGATATTTTGGTTAATATTGTTGGGAAGCGTACTGTGCCACAAGTTTTCATCAATGGAAAACACCTTGGAGGATCAGATGATACTGTCGAAGCTTATGAAAGTGGGCTTCTAGCTAAACTTCTAGGAATTGAGACAGAGGATCACCATGATGATCTCTGA 414 0.4034 MAVSARINVTVMMVMVALAISLYWDSASASSVGEFVDKTINSHTIVIFSKTYCPYCRRAKAVFKELNQVPHVVELDERDDGSKIQDILVNIVGKRTVPQVFINGKHLGGSDDTVEAYESGLLAKLLGIETEDHHDDL 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02690 137 Pfam Glutaredoxin 45 106 IPR002109 -
Tsu08g02690 137 CDD GRX_GRXh_1_2_like 45 125 - -
Tsu08g02690 137 TIGRFAM GRX_euk: glutaredoxin 45 125 IPR011899 -
Tsu08g02690 137 Gene3D Glutaredoxin 23 127 - -
Tsu08g02690 137 PRINTS Glutaredoxin signature 45 63 IPR014025 -
Tsu08g02690 137 PRINTS Glutaredoxin signature 90 103 IPR014025 -
Tsu08g02690 137 PRINTS Glutaredoxin signature 104 117 IPR014025 -
Tsu08g02690 137 ProSitePatterns Glutaredoxin active site. 47 62 IPR011767 -
Tsu08g02690 137 ProSiteProfiles Glutaredoxin domain profile. 33 133 - -
Tsu08g02690 137 PANTHER GLUTAREDOXIN 2 8 124 - -
Tsu08g02690 137 SUPERFAMILY Thioredoxin-like 34 126 IPR036249 -
Tsu08g02690 137 PANTHER BNAA02G04900D PROTEIN 8 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02690 Tsu-Chr8 41054342 41057930 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02690 34 126 Miscellaneous Gene Families AT4G15700 33.333 1.10e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02690 K03676 - gmx:100305955 207.608