Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02627 ATGGTGGTTAGGATTCGGCTATCACGTTTAGGGTGCAAAAACAAACCATTCTATCGCGTCATGGCTGCCGATAGCAGATCTCCAAGAGACGGTAAACATCTCGAAGTTCTCGGTTACTACAATCCCTTACCTGGTCAAGATGGTGGCAAAAGAATGGGTATCAACTTTGATAGAGTCAAgtATTGGCTTTCTGTTGGAGCTCAACCATCAAATCCTGTTGAGCGTCTTCTGTTTCGAGCAGGGCTACTTCCTCCACCACCGACTGTGGCTATGGCACGCAAAGGTGGACCACGCGACACACGTCCTGTCGATGCTTTAACCGGACGTGTACTTGGTGAACAGAAGCCTCCTACTTCCAACAAGAATGATACTACAGTAACTGAAAACCCTTGA 393 0.4733 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDTRPVDALTGRVLGEQKPPTSNKNDTTVTENP 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02627 130 MobiDBLite consensus disorder prediction 86 130 - -
Tsu08g02627 130 PANTHER 30S RIBOSOMAL PROTEIN S16 1 111 IPR000307 GO:0003735|GO:0005840|GO:0006412
Tsu08g02627 130 SUPERFAMILY Ribosomal protein S16 3 94 IPR023803 -
Tsu08g02627 130 Pfam Ribosomal protein S16 9 70 IPR000307 GO:0003735|GO:0005840|GO:0006412
Tsu08g02627 130 Gene3D - 1 126 IPR023803 -
Tsu08g02627 130 MobiDBLite consensus disorder prediction 113 130 - -
Tsu08g02627 130 Hamap 30S ribosomal protein S16 [rpsP]. 2 80 IPR000307 GO:0003735|GO:0005840|GO:0006412
Tsu08g02627 130 TIGRFAM S16: ribosomal protein bS16 3 82 IPR000307 GO:0003735|GO:0005840|GO:0006412
Tsu08g02627 130 PANTHER 30S RIBOSOMAL PROTEIN S16-LIKE 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02627 Tsu-Chr8 39590277 39591959 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02627 K02959 - gmx:100305630 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g02627 08 39590277 39591959 Tsu08g02627 08 39590277 39591959 ECH