Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02605 ATGGAAGAAAACAATTCTCAATCTGATtctccaaaatcaaaaccagatCTAATCGATTTAAACACAGAAATTTCCaattccaacaacaacaatgatACCTCGTTGGAAACAATTGTTCGGAGTTTCCAAGATTCAATGTCTGtaacaaaacaacacaaattctGGGAAACACAACCAGTTGGTCAATACAAAGATGTTGGTGACACATCTTTACCAGAAGGACCAATTGAACCACCAACACCTTTATCAGAAGTGAAACAAGAACCTTATAATTTACCAGCAGCTTATGAATGGACAACATGTGACATGAGTTTTGGAGAAACATGTGATGAGGTTTATCTTCTTTTGAAGAATAATtatgttgaagatgatgaaaataTGTTTAGGTTTAATTATTCTAAGGAATTTCTTACATGGGCTTTATGTGTTCCTGGTTATTATAAGAATTGGCATATTGGGGTTCGAGCGAAAGGTTCGAAGAAATTAGTTGCTTTTATAACTGGTATTCCTGCTAGGATTAGGGTTAATGATAATGTTGTGAAAATGGctgagattaattttttatgcgTTCATAAGAAACTTAGATCGAAAAGACTTGCACCGGTTATGATTAAGGAAGTTACTAGGAGGGTTCATTTGGAAAATATTTGGCAAGCGGCTTATACTGCCGGGGTTGTTATTCCAACCCCGGTTGCTACTTGTCAGTATTGGCATAGGTCGTTGAACCCAAAGAAGCTTATTGATGTTGGGTTTTCGAGGCTTGGTGCTAGGATGACTATGAGTCGGACTATTAAGCTTTATAAGTTGCCTGATTCGACGTTTACTAGTGGGTTTAGAAAAATGGAGTTGAGGGATGTTCCGGCGGTTACGCGGTTGCTTAGGAATTACTTGGAAAAGTTTGTTGTTGCGCCTGATTTAGATGAAAATGATGTTGAACATTGGCTTCTTCCGCATGAGGATGTTGTCAATAGTTACTTGGTTGAGAGTCCTGAAAACCATGAGATCACTGATTTTTGTAGCTTTTACACATTACCTTCTTCAATCCTTGGAAATCAGAGTTACTCAACTTTGAAAGCTGCTTATTCTTATTATAATGTGGCTACGAAAACTCCACTGGCTCAGTTGATGAACGATGCGCTGATTATGGCAAAGCAGAAGGATTTCGATGTTTTCAATGCCTTGGATGTAATGCATAATGAAGGTTTCCTTAAAGATCTCAAGTTTGGACCTGGAGATGGACAACTTCACTACTACTTGTACAATTATAGGATTCGTAAAGCCTTGAAACCATCTGAACTTGGTCTTGTTCTCTTGTAG 1317 0.3538 MEENNSQSDSPKSKPDLIDLNTEISNSNNNNDTSLETIVRSFQDSMSVTKQHKFWETQPVGQYKDVGDTSLPEGPIEPPTPLSEVKQEPYNLPAAYEWTTCDMSFGETCDEVYLLLKNNYVEDDENMFRFNYSKEFLTWALCVPGYYKNWHIGVRAKGSKKLVAFITGIPARIRVNDNVVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVVIPTPVATCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPDSTFTSGFRKMELRDVPAVTRLLRNYLEKFVVAPDLDENDVEHWLLPHEDVVNSYLVESPENHEITDFCSFYTLPSSILGNQSYSTLKAAYSYYNVATKTPLAQLMNDALIMAKQKDFDVFNALDVMHNEGFLKDLKFGPGDGQLHYYLYNYRIRKALKPSELGLVLL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02605 438 Pfam Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain 75 234 IPR022676 GO:0004379
Tsu08g02605 438 Gene3D - 43 438 - -
Tsu08g02605 438 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 49 235 IPR016181 -
Tsu08g02605 438 MobiDBLite consensus disorder prediction 10 32 - -
Tsu08g02605 438 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 248 426 IPR022677 GO:0004379
Tsu08g02605 438 PANTHER N-MYRISTOYL TRANSFERASE 19 438 IPR000903 GO:0004379|GO:0006499
Tsu08g02605 438 PIRSF N-myristl_transf 2 438 IPR000903 GO:0004379|GO:0006499
Tsu08g02605 438 MobiDBLite consensus disorder prediction 1 32 - -
Tsu08g02605 438 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 1. 184 192 IPR022678 GO:0004379
Tsu08g02605 438 PANTHER GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 19 438 - -
Tsu08g02605 438 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 407 413 IPR022678 GO:0004379
Tsu08g02605 438 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 236 438 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02605 Tsu-Chr8 39212737 39215823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02605 1 438 Acyl Lipid Metabolism Gene Families AT5G57020 80.822 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02605 K00671 - gmx:100787291 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g02605 08 39212737 39215823 Tsu08g02605 08 39212737 39215823 ECH