Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02588 ATGAAGTTTTTGGCGCCGCTACCGAGGACTATTCGAAGAATTGAGGCAACAAAAAGTTTCTGCAGAATTTCTATTTCTGTCCCTTTTGACAGTCCAGACACCAGCCATGAGCTGAGTGTGATTGACGTTAAAATTTTGGTTCTCCGCGTGTACCAGGAAGTagataataatgatgatgagaaagTTGAAGTGAATATATATCCTCTTAATTCTTACTATTTTGGATCCAAAGATTCTATTCCTTCTAAAGATCATTCACTTCATCATCGTCTTCAAAGAATTAAATCCAACTTTGATGCCCGTGGAATGAGAACTTGTGTGGAAGCTGTTATGATGGTTGAGTTGTTCAAACATCCACATTTGTtgttatttcaaataaaaaattccatCTTTAAACTTCCCGGTGGCCGTTTAAGGCCAGATGAATCAGATATCGATGGATTAAAGCGTAAGCTCGCAAGGAAGCTTTCTCTTGATGAAGATGGTGTTGGGGCAGAATGGGAGACATACGGGCCAATTATATCTGTGATCCCGCAGCTACTCTCAAAATTCTCTTTCAATATGATCGGAATTTAA 576 0.3698 MKFLAPLPRTIRRIEATKSFCRISISVPFDSPDTSHELSVIDVKILVLRVYQEVDNNDDEKVEVNIYPLNSYYFGSKDSIPSKDHSLHHRLQRIKSNFDARGMRTCVEAVMMVELFKHPHLLLFQIKNSIFKLPGGRLRPDESDIDGLKRKLARKLSLDEDGVGAEWETYGPIISVIPQLLSKFSFNMIGI 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02588 191 PANTHER PRE-MRNA CLEAVAGE FACTOR IM 25 KDA SUBUNIT 1 52 168 - -
Tsu08g02588 191 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 52 168 IPR016706 GO:0003729|GO:0005849|GO:0006378
Tsu08g02588 191 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 62 169 - -
Tsu08g02588 191 Pfam Nucleotide hydrolase 63 168 IPR016706 GO:0003729|GO:0005849|GO:0006378
Tsu08g02588 191 SUPERFAMILY Nudix 108 160 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02588 Tsu-Chr8 38871499 38876482 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02588 K14397 - gmx:100791216 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g02588 08 38871499 38876482 Tsu08g02588 08 38871499 38876482 ECH