Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02562 ATGGGTGCTAGAAGAAGTTGGCACCTTGTGTTATGTTTTCTGTGTGTTTCCTTTTGTTCAGGTCTAGGTAAAGCCATAAGATTAAGAGAAGATTCAGTATATGAATTTAGTACTACTCAATTGGATTCAATTCCAGTTGTGAACCCAACAACACCAGGAACAGGAAATCCTTATCCTACAATCAACCCAACATCTCCTCAACCACCTGACACAAGTACAGGACAGACTCCCCCAACCCCAGACACCTCCTCAAGCCCAACTAATCCATATTCAAACCCACCAGCCTCTACAAATCCATATTCAAACCCAACAAGCCCAACTGTGACTCCCACAACACCAACTACAACAAGCCCAACTGTGACTCCCACAACACCAACTACAACAACTCCAACAAGCCCAACaggatcatcatcatcatcatctggTGGTGGTCAATGGTGTGTTGCAAGTCAATCATCTGCAGAGACTACTTTAAAGGTAGCTCTTGATTATGCTTGTGGATATGGTGCTGATTGTTCTCAAATTCAACAAGGAGGAGTTTGTTTTGACCCAGATACATTGAGAGACCATGCTTCTTATGCATTCAATGATTACTATCAAAAGAATCCTGCACCAACTAGCTGTGTATTTGGAGGAGTAGCAACACTTACAAACAAAGATCCAAGTCATGGGAATTGCCACTTTTCATCCTCCAAAACAACAAGCATGAGTCCACCAACATATGTAAGCCCACCAAATTCACTAAGTCCACCTACTACAATGACTCCACCTTCACCAACAACTATGACTCCACCAAGTTTTATGACGCCACCAAGCATGACAATGCCTGATCCTGATGGAGGATCATCATCGGTCTATGGTTCACCACCAGGAGGAAGCCCCAATATAGCCACATCTACTTCTTATTCCATACTCCTGCTACTTACAACCGGCCTTTGTGCGACACTTCATGTGCATAACTACATCTAG 969 0.4231 MGARRSWHLVLCFLCVSFCSGLGKAIRLREDSVYEFSTTQLDSIPVVNPTTPGTGNPYPTINPTSPQPPDTSTGQTPPTPDTSSSPTNPYSNPPASTNPYSNPTSPTVTPTTPTTTSPTVTPTTPTTTTPTSPTGSSSSSSGGGQWCVASQSSAETTLKVALDYACGYGADCSQIQQGGVCFDPDTLRDHASYAFNDYYQKNPAPTSCVFGGVATLTNKDPSHGNCHFSSSKTTSMSPPTYVSPPNSLSPPTTMTPPSPTTMTPPSFMTPPSMTMPDPDGGSSSVYGSPPGGSPNIATSTSYSILLLLTTGLCATLHVHNYI 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02562 322 MobiDBLite consensus disorder prediction 43 147 - -
Tsu08g02562 322 PANTHER BETA-1,3 GLUCANASE 10 313 - -
Tsu08g02562 322 MobiDBLite consensus disorder prediction 243 272 - -
Tsu08g02562 322 MobiDBLite consensus disorder prediction 59 75 - -
Tsu08g02562 322 SMART X8_cls 145 228 IPR012946 -
Tsu08g02562 322 MobiDBLite consensus disorder prediction 76 147 - -
Tsu08g02562 322 PANTHER BETA-1,3 GLUCANASE 10 313 IPR044788 -
Tsu08g02562 322 MobiDBLite consensus disorder prediction 225 292 - -
Tsu08g02562 322 MobiDBLite consensus disorder prediction 225 242 - -
Tsu08g02562 322 Pfam X8 domain 145 215 IPR012946 -
Tsu08g02562 322 Gene3D - 143 240 - -
Tsu08g02562 322 MobiDBLite consensus disorder prediction 43 58 - -
Tsu08g02562 322 MobiDBLite consensus disorder prediction 276 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02562 Tsu-Chr8 38464176 38466482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02562 121 228 Glycoside Hydrolase AT4G26830 45.045 4.29e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02562 - - lja:Lj6g3v1093470.1 200.29