Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02540 ATGGATTCCCCACCTTCCCAACAAACGTGGGGAAGATCATCAACCCTTTCCACCACAAATCATCTCAACCGTACATCTTCATCACCTTCCTCATCTTCTTCCCCATCTTTCTCCAAAGATTCAATCCAAAGCCTCTCTTCCATTCTCAACAACCCTCTCTCTTCAACCACCGTTTACCCTCCCGAATTTTCACCAATCTCTTCAATCAAATCCACCTCCGAAGTCACCCGATCCGATTTCATTTCTTATCTAACAACCGTCTCCGATCCTTTTCACCGATTCGATGACATCCGTAAACACGCTACCAAAGAGATCTCCGGTAACGACGTTGATGGTGCCGGTGCTGGCGAAGCGCTTGTAGCTTGTCTTCGTGAGGTTCCGTCGCTTTACTTTAAAGAAGATTTTCGATTGGAAGAAGGTGCTACGTTTCGTGCTGCGTGTCCTTTTTCGACATTCAATGAGAACGCTGTGTTGCAGGAGAAGCTTTCGCAGtatcttgatgttgttgagCTTCATCTTGTTAAGGAGATCTCCCTTCGGTCTTCTTCGTTTTTCGAAGCTCAGGGGCAGTTACAGGATCTTAATGGTAAGATCGTTGAAGGATGTGCGAGGATTCGTGAATTGAAGGATACGGTTCGGCTTATTGATTCGGATTTGGTTGAGTCTGCTAGGCAGATTCAGCAGCTCAATGGTACCAGGACGAATCTGTTGGCGCTTCAGCAGAAACTCAGACTCATTTTATATGTTAATCAAGCACTCTCTGCCCTCAAATTGCTTGTTACATCTGCAGATTGTGCTGGAGCACTGGACGTAACTGATGATTTGCAACATTTGCTGGATGGAGATGAGCTCACTGGCTTGCATTGCTTTCGTCATCTTAGAGATCATGTGACAGGATTTATAGAATCCATAAACAGCATTCTTTCAGCAGAGTTTATTCGAGCTTCTTTACACGATGCTGCAGAATCAGATGCGATAATTTTATCTAAAGCTAAATCAAGAGCTTCCATTCCCATGAACGGAAAAGATGAAgtaaaattggaagaagaagaagaaacaactAATTTCAAAGATAGTCTTCTCCCTACAGTAATTGGCTTGCTTAGAACTgcTAAACTTCCCTCTATTCTGAGGATCTATCGAGACACACTGACTGCTGATATGAAGAGTGCTATTAAAACTGCTGTTGCTGAGTTGCTTCCAGTTCTTGCTTCCCGAGGTTCAGAATCAGAGTTCTTTTCTGGAGACAGAGTTGTAGAGGCAGATGGTGGTGGTGCTTCACTTGCTAGCAAGTTAAGGAGTCTGTCGTCTGATTGCTTTGTCCATCTTTTGAGTGCTATTTTCATGATAGTACAGGCACATTTAGTGCGGGCTGCTGAAGTGAAAAAAGCcattgaatggattttgagcaACTGTGATGGTCATTATGCTTCTGATTCAGTTGCAGCTGCAATTGCTCATGGTGCTGCAGCGGCAGAAATATCCCAAGAAAGTGAGGTTCATGGTACTACGTTTTTTCCATATTCACCGCAAAGAAATGTTGCCAAGGGTCCCTCTTTTCAGGGAAAAGCAATTGATGCTGCAAGCTCCTCAAACATGTCAAAAAATTTCAGAGCTGATGTATTGCGAGAAAACGCAGAAGCTGTCTTTGCAGCATGTGATGCTGCTCATGGAAGATGGGCAAAGCTTCTGGGTGTCCGTGCCGTTCTCCATCCTAGGTTGAAACTGCAGGAGTTTCTAACTATTTACAACATCACCCATGAGTTCATTACAGCTACAGAAAAAATTGGTGGAAGATTGGGATACAGCATCCGTGGGACACTGCAGTCACAGGCCAAGGCTTTTATTGATTTTCAGCATGATTCTCGGATGTCAAAAATTAAGGCAGTGCTTGACCAGGAAACTTGGGTGGAGATAGATGTTCCTGATGAATTTCAATCCATTATCAATATGCTTTTTTCATCGGATGCACTGTCTTCTGGGAACCTTAATGGTGTTGAAGAAGATAATTCAATCAACTACAATGATATGGCGACAAACAATGATGCTCGGCCGATGGCAGACACTGGACCGTCAAATGCTGAACAGAATATGGAGCAGACTGATTCCGCGGAAGAATCTAAGAAACCAAATAGAGGTCATAGTCATAGTAAATCAGTAGAGAGTATTAGCACCGAGAAAGATCATAAGAAGTCTGCATCTCAGGCTCTTTTTTACAAAGGTGTTGGTTATCACATGGTAAACTGTGGCTTGATATTGCTGAAGATGTTGTCAGAATATATTGATATGAACAACCTTTTGCCAACACTATCGTCAGAAGTTGTTCACCGTGTGGCAGAAATCTTGAAGTTTTTCAACACAAGAACATGTCAACTTGTGCTAGGGGCTGGTGCAATGCAGGTGTCTGGTTTGAAGTCCATCACCTCTAAACACCTGGCGCTGGCAAGTCAAGTCATTAGCTTCATACATGCTATTATTCCCGAAATTCGGCAGATTCTTTTTCTGAAAGTACCAGAGACTAGAAAATTGCTATTGCTTTCAGAGATTGATCGAGTTGCGCAGGATTATAAAGTCCATAGAGATGAAATACATACTAAATTGGTTCAGATAATGCGAGAAAGATTATTAGTACATTTGCGTGGGTTGCCTCAAATTGTTGAGAGTTGGAATAGACCTGAGGATGCTGATCCCCAGCCTAGTCAATTTGCTCGGTCCCTTACAAAGGAAGTTGGATACCTCCAGCGTGTTCTATCTCGAACCTTGAATGAAGAAGATGTTCAGGCAATTTTCAGGCAAGTGGTGATTATCTTTCACTCACAAATTTCAGAAGCATTTTCAAGATTTGATATAAGCACTTCACAAACACAGAATAGGTTATATCGGGACGTCAAACATATTCTCCAATGCATACGGTCATTGCCATCGGGTGATTTAAATAAATCTGATACCCCTAACTGGGGTCAGCTCGATGAATTCTTGGTGCAAAGATTTGGGAATGCTGCTGTTCAGCTAACCTACTTTAGAGGATGTGGGGGTGATTTAAACCTTCTTCACTCTGCATTTTTGTGTAACACTAAGTTGAGgCCTTTGGTAGATATACAAGCCATGAATATTAATGCATCAATGTGTACATGA 3135 0.4166 MDSPPSQQTWGRSSTLSTTNHLNRTSSSPSSSSSPSFSKDSIQSLSSILNNPLSSTTVYPPEFSPISSIKSTSEVTRSDFISYLTTVSDPFHRFDDIRKHATKEISGNDVDGAGAGEALVACLREVPSLYFKEDFRLEEGATFRAACPFSTFNENAVLQEKLSQYLDVVELHLVKEISLRSSSFFEAQGQLQDLNGKIVEGCARIRELKDTVRLIDSDLVESARQIQQLNGTRTNLLALQQKLRLILYVNQALSALKLLVTSADCAGALDVTDDLQHLLDGDELTGLHCFRHLRDHVTGFIESINSILSAEFIRASLHDAAESDAIILSKAKSRASIPMNGKDEVKLEEEEETTNFKDSLLPTVIGLLRTAKLPSILRIYRDTLTADMKSAIKTAVAELLPVLASRGSESEFFSGDRVVEADGGGASLASKLRSLSSDCFVHLLSAIFMIVQAHLVRAAEVKKAIEWILSNCDGHYASDSVAAAIAHGAAAAEISQESEVHGTTFFPYSPQRNVAKGPSFQGKAIDAASSSNMSKNFRADVLRENAEAVFAACDAAHGRWAKLLGVRAVLHPRLKLQEFLTIYNITHEFITATEKIGGRLGYSIRGTLQSQAKAFIDFQHDSRMSKIKAVLDQETWVEIDVPDEFQSIINMLFSSDALSSGNLNGVEEDNSINYNDMATNNDARPMADTGPSNAEQNMEQTDSAEESKKPNRGHSHSKSVESISTEKDHKKSASQALFYKGVGYHMVNCGLILLKMLSEYIDMNNLLPTLSSEVVHRVAEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVISFIHAIIPEIRQILFLKVPETRKLLLLSEIDRVAQDYKVHRDEIHTKLVQIMRERLLVHLRGLPQIVESWNRPEDADPQPSQFARSLTKEVGYLQRVLSRTLNEEDVQAIFRQVVIIFHSQISEAFSRFDISTSQTQNRLYRDVKHILQCIRSLPSGDLNKSDTPNWGQLDEFLVQRFGNAAVQLTYFRGCGGDLNLLHSAFLCNTKLRPLVDIQAMNINASMCT 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02540 1044 MobiDBLite consensus disorder prediction 669 728 - -
Tsu08g02540 1044 MobiDBLite consensus disorder prediction 701 728 - -
Tsu08g02540 1044 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 54, CHLOROPLASTIC 1 1001 - -
Tsu08g02540 1044 MobiDBLite consensus disorder prediction 669 700 - -
Tsu08g02540 1044 PANTHER VACUOLAR PROTEIN SORTING 54 1 1001 IPR039745 GO:0000938|GO:0042147
Tsu08g02540 1044 Pfam Vps54-like protein 744 874 IPR012501 GO:0042147
Tsu08g02540 1044 Gene3D - 842 881 - -
Tsu08g02540 1044 MobiDBLite consensus disorder prediction 1 39 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02540 K17600 - gmx:100804432 1538.86