Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02528 ATGGCTTCAAGAAATGGTGAAGAGAAAGTTGAACTTGGTTTCAATGATGTTAATGAGACAAAGACAAAGAAGGATTGGATCCTTTTGTCCCTTAGGGTGGTTGCATTTTGTGCTACTACAGCTGCAACACTTGTGATGGCACTAAATAAACAAACCAAAAGTTTGATTGTTGGTACCATTGGTAACACCCCAATAACTGCTACTCTTTCTGCTAAGTTTAATCAAACTCCAGCTTTTGTGTTCTTTGTGATAGCCAATGGAAATGCTAGTCTCCATAACTTGGTGATGATTGCATTAGATATATTAGGACCCCAATATGATTACAAAGGACTTCGCCTTGCATTGATTGCAATATTAGACATGTTAACTATGGCTCTAGCATCAGCTGGAGATGGTGCAGCAACATTCATGTCAGAATTGGGAAGAAATGGTAATTCACATGCAAGATGGGATAAGATTTGTGACAAATTTGAAAGCTATTGCAATAGAGGTGGTGGTGCACTCATTGCTTCTTTCATtggcttcattcttctcttgattATCACAGTCATGTCCATTGCAAAGCTTCTCAAGCCAAATCGCATTAACCATGCTCCTATTCCTTGA 606 0.3746 MASRNGEEKVELGFNDVNETKTKKDWILLSLRVVAFCATTAATLVMALNKQTKSLIVGTIGNTPITATLSAKFNQTPAFVFFVIANGNASLHNLVMIALDILGPQYDYKGLRLALIAILDMLTMALASAGDGAATFMSELGRNGNSHARWDKICDKFESYCNRGGGALIASFIGFILLLIITVMSIAKLLKPNRINHAPIP 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02528 201 PANTHER CASP-LIKE PROTEIN 1B2 18 194 - -
Tsu08g02528 201 Pfam Casparian strip membrane protein domain 23 177 IPR006702 -
Tsu08g02528 201 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 18 194 - -
Tsu08g02528 201 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 29 188 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02528 Tsu-Chr8 37886143 37887295 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02528 - - gmx:100792043 318.931