Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02521 ATGGCGTCCTCTGATCCCAACAAGTTATTATCCAAAGCTGATAAACTAACAAGACTCAGTCTCACTAGGTGGAGTGCCGATTGGAAGACTGCTACTGTTCTTTATGAACAGGCTGCTAATGGGTTTAGAGTTTCCAAGAACATTGAGAAAGCTAAAACGGCGTATGAGAAAGCTTCGCAAGGACAACAAATGCTTTCTTCACCTTGGGACGCTGCTAAGCACATGGAATCTGCCGCTGCTCTGGCTAAGGAACTAAGCAACTGGAGAGAAGTTGCGGACTTctatcaaaaggcatctgagTTGTACATGGAGTGTGGGAGACCACAACCTGCTTCGGATGCTCTTGCAAAGGGTGCTCGTGCTTTGGAAGATACCATGCCTGAAGAAGCAATTCAGTTATATACAGATGCTATTACAATTCTCGAAGACGATGAAAAGGAACAAATGGCCTTTGATCTATACCGTGCTGTAACTAGTGTTTATATAAAACTTGAGAAATATACAGACGCTGCGTCTTCACTGTTGAGATTGGGCTTGGCAGCTGACAAGTGTAATGCTACCAATAGTCAGACCAAGGCTTATCTTAGTGCGATTATTGTCTACCTTTACGCTCACGACTTTAAGCAAGCAGAGCAGTGCTATAATGATTGTTCTCAGATTGATGCTTTTCTCAAAAGTGACCATAGCCGTTGCGCTGGCAAGTTCCTTTCTGCTTACACAGATGGAGACGTCgacgaaattaaaaaaattgctcAGTCTAGTGCTGTTTCTCATCTTGACCACGCAATCATTAGGCTCGCGAGGAAACTTCCGACCGGTGATGTGAGTTCATTAAAGGCTGTCACTGCCGGAGATGATGAAGAGCCACTGGACGAAAATGACCTGACCTAA 891 0.4276 MASSDPNKLLSKADKLTRLSLTRWSADWKTATVLYEQAANGFRVSKNIEKAKTAYEKASQGQQMLSSPWDAAKHMESAAALAKELSNWREVADFYQKASELYMECGRPQPASDALAKGARALEDTMPEEAIQLYTDAITILEDDEKEQMAFDLYRAVTSVYIKLEKYTDAASSLLRLGLAADKCNATNSQTKAYLSAIIVYLYAHDFKQAEQCYNDCSQIDAFLKSDHSRCAGKFLSAYTDGDVDEIKKIAQSSAVSHLDHAIIRLARKLPTGDVSSLKAVTAGDDEEPLDENDLT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02521 296 Pfam Soluble NSF attachment protein, SNAP 5 260 - -
Tsu08g02521 296 PANTHER GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN 2 280 - -
Tsu08g02521 296 SUPERFAMILY TPR-like 7 250 IPR011990 GO:0005515
Tsu08g02521 296 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 2 280 IPR000744 GO:0006886
Tsu08g02521 296 Gene3D Tetratricopeptide repeat domain 3 272 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02521 Tsu-Chr8 37663556 37670219 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02521 K21198 - gmx:100790986 496.508