Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02516 ATGACTAAATTTGAGGTAGTATTCGTTTCTACACCAACCATTGGAAACATGGTTCCAACTGTTGAATTCGCCAACTTCTTAACCAAACACCACCCTCAACTCTCTGCAACCATTCTCAAAATCTCTGCATCAAAACAACCACTTGTTAACACTTACCTTCAATCTCGTCCTTCCTCAGCAACTAATCTTCGTTTCATTCATCTCCCTACTGTAGACCCGCCCACACCCGATCAATACAAATCCTTCATCGCTTACATCTCCCTCCTAattcaaaaacacaaaaacaatatCAAAGGCGCACTCCTCAACCTCACTTCAACTAAGTCAATTTCCGAATCGGTTAAACTCATTGCTTTGTTCGTCGACATGTTCTCCACCACCATCATTGATGTCGCCAATGAGATCAATGTTCCTTTTTACCTCTTCTTTGCCTCACCAGCAAGTTTTCTTGGATTTACGCTTCATTTCCCCCGAATCGAATCAGTTGAAATGGAAACTGAGTTTAAAATCCCGAGTTTCAAAAATTTGCTTCCTAAACATGTTTTGCCTAACATGGTCTTGAATTGGAAATCTGAAGAAGACGCTTATTCGTGGGTTTCATATCATGGAGGAAGGTACAAAGAAACAAAGGGTATTGTTGTAAATACCTTACAAGAGCTTGAACCTTACGCTCTTCAATCACTTTACGACGATTTGCAACTTCCACCTATTTACTCAATTGGGCCGATTCTTGACCTTGTTGGACCGGTCCAATGGGACCCAAATCCGGTCCAATATAATTATATCATGGATTGGCTAGATTTGCAGCCTCTTGG 815 0.4037 MTKFEVVFVSTPTIGNMVPTVEFANFLTKHHPQLSATILKISASKQPLVNTYLQSRPSSATNLRFIHLPTVDPPTPDQYKSFIAYISLLIQKHKNNIKGALLNLTSTKSISESVKLIALFVDMFSTTIIDVANEINVPFYLFFASPASFLGFTLHFPRIESVEMETEFKIPSFKNLLPKHVLPNMVLNWKSEEDAYSWVSYHGGRYKETKGIVVNTLQELEPYALQSLYDDLQLPPIYSIGPILDLVGPVQWDPNPVQYNYIMDWLDLQPL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02516 271 PANTHER GLYCOSYLTRANSFERASE 4 270 - -
Tsu08g02516 271 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 270 - -
Tsu08g02516 271 Gene3D Glycogen Phosphorylase B; 1 269 - -
Tsu08g02516 271 PANTHER GLYCOSYLTRANSFERASE 4 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02516 Tsu-Chr8 37499214 37500028 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02516 1 270 Glycosyltransferase AT2G29730 29.496 1.27e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02516 - - gmx:100775567 377.481