Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02446 ATGTTAGCTTCTTCGCTCTCATTCCTTCATTCTTGCACATttccctcttcttcttcttcttcttcttcttcttcttccttgcttACAATTCCAAATcccaattcatcttcttcctctttatcTTTTGTCGTTCAAGCCAGTCGAAGGGAAGACAGAACTGCCCGCCATGTTCGTATCAGAAAGAAGattGAAGGAACACCCGAAAGACCAAGATTATCTATCTTCCGATCCAACAAGCATCTATTTGTCCAGGTGATTGATGACACCAAGATGCATACACTTGCTTCAGCTTCGACAATGCAGAAAGCAATTGCTGCAGAGTTGAACTACACTGCCAGCCCTACGATTGAAGTAGCAAAAAGGATGGGTGAGATCATTGCAAAATCCTGTCTGGAGAAAGGGATCACAAAGGTAGCATTTGACCGAGGTGGTTACCCATACCATGGCCGTATTAAAGCTATTGCTGATGCGGCTCGCGAACAGGGACTCGATTTCTAA 498 0.3835 MLASSLSFLHSCTFPSSSSSSSSSSSLLTIPNPNSSSSSLSFVVQASRREDRTARHVRIRKKIEGTPERPRLSIFRSNKHLFVQVIDDTKMHTLASASTMQKAIAAELNYTASPTIEVAKRMGEIIAKSCLEKGITKVAFDRGGYPYHGRIKAIADAAREQGLDF 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02446 165 Hamap 50S ribosomal protein L18 [rplR]. 47 165 IPR004389 GO:0003735|GO:0005840|GO:0006412
Tsu08g02446 165 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 18 165 IPR005484 GO:0003735|GO:0005840|GO:0006412
Tsu08g02446 165 SUPERFAMILY Translational machinery components 48 163 - -
Tsu08g02446 165 CDD Ribosomal_L18_L5e 59 163 - -
Tsu08g02446 165 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 18 165 - -
Tsu08g02446 165 TIGRFAM L18_bact: ribosomal protein uL18 49 165 IPR004389 GO:0003735|GO:0005840|GO:0006412
Tsu08g02446 165 MobiDBLite consensus disorder prediction 11 43 - -
Tsu08g02446 165 Gene3D - 46 165 - -
Tsu08g02446 165 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 47 165 IPR005484 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02446 K02881 - gmx:100306308 214.542