Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02397 ATGGTAAATCTAAATTCTTTGGGTTGCTTTGTTGTTCACATAGCTTTCATTGCTTCACTTAGTCTCAGCACATCACAAAGTCACATAAGCGAAAATGGAAATGATATTACCAATGCCCTTTTCATATTTGGTGACTCTACTGTTGATTCTGGCAACAACAACTATATAGATACTACTCCTGAGAACAAAGCAGATTATAAACCATATGGACAAAATAGGGTTTTTCATGAACCTACCGGTCGGTTTTCCGATGGCCGTGTCATTACAGAATTTATAGCTGAATATGCAAAGTTGCCTCTGATTCCTCCATTTTTACAACCATCTATTGATTATAGTAATGGTGTCAACTTTGCTTCTGGTGGAGCTGGTGTTCTTGCTGAAACCAATCAGGGACTGgtGATTGATCTTTCAACACAATTAAGGAAGTTTGAACAAGTGAAGAAATCACTAGCAGAAAAGCTTGGAGAGGAAAAGTCAAATGAGTTTATTTCAGAACCAGTTTATTTCATTAGCATTGGAAGCAATGATTACATGGGTGGCTATTTAGGTAATCCAAAAATGCAAGAAAAATACAATCCTGAACAATATGTTGGGATAGTGATTGGAAACTTGACACAAGCAATTCAAGTAAGAAtctCGATTCTATATGAGAAAGGTGCTAGAAAGTTTGGATTTTTAAGTTTGTCTCCATTGGGTTGCCTACCAGCCCTTAGAGCTGCAAATCCTGATGAATCAAACAAAGGTGGTTATTTTGAAGCAGCTTCTTCTCTTGCTCTAGCACAAAATAATGCTTTGAGTAATGTTGTCACAAGCATCAACCAAGTTTTCAAAGGGTTCTTGTACTCAAATTCTAACTTCTATGATTGGCTTCAAGAAAAAATAACTAACCCCACAAATTATGGTTTTATGGATGGGATTAATGCATGTTGTGGAAGTGGACCATATGGAGGAGTCACGATACTCTCCTCCTATCCAGGAGAAGGCGAGCGATGGGAGGCCAATGATTCGTCCAGATGGTCGAGGAGTTATGTTGCTTGGCTGCCTGAGCATAATTATCAGATTAAGAAAATCTTTGAATCTAAAGGCTCAAGCCGTCTTTCTGCGATGTACATGGAAGTGAGGAACAAGTGCGAACGCCCATCTTGGATAGGCGAGGAAGCTTGGAATGAGCTTGTTATTGAGTGGCAGAAGCCAGAATATAAAGTGCTATCACggcaaaataagaaaaatcgCGCTTCTGCTAAAGGTGGGTCTGTCCATACTGGCGGATCCATAACTTTCACTGAGCATACCTTACGGATGGGTAAATTTCAGACTAAGTTGAATCAAGAATCAGAAGGTGCAGATACAGATGGGAGTGGTACCCAAATGGTCGACCCTGCGACTCGTTTAAATCTGTGGGCCACATCAGCTGGGGGAAAAATCGAGGACGTCTCTATGGTGTTGGAGATAGGTCCTCGCATTATAGACCAGTTGGCCACACTTGAGGAGCGAGCAAAGACAGCAGAGGATGAGGTTCGAAAAACAAGGGAGGAGCTTAGGCAAGCAGAGATTAACCGAAAAAATGAAGCTCAGCAATCTGAGGAGCGTGCTGCAGAGTTCCAGAGGCAGCTAATAGCATTGACAAAGAATGTAGCTGCCATGCAGGCCTCAGCTGAGGCCTCTCGTCGTCGACGTCGTCATCCAGATTATGATGAGGATGAGTCTGAGGATGGGTCCGAGGATGGGTCTGAGGATGGGTCCGAGGATGGGTCTGAGATGGGTCCGACAGTATCAGTGATGATGACAACGGggaaaattgatatttaa 1809 0.4168 MVNLNSLGCFVVHIAFIASLSLSTSQSHISENGNDITNALFIFGDSTVDSGNNNYIDTTPENKADYKPYGQNRVFHEPTGRFSDGRVITEFIAEYAKLPLIPPFLQPSIDYSNGVNFASGGAGVLAETNQGLVIDLSTQLRKFEQVKKSLAEKLGEEKSNEFISEPVYFISIGSNDYMGGYLGNPKMQEKYNPEQYVGIVIGNLTQAIQVRISILYEKGARKFGFLSLSPLGCLPALRAANPDESNKGGYFEAASSLALAQNNALSNVVTSINQVFKGFLYSNSNFYDWLQEKITNPTNYGFMDGINACCGSGPYGGVTILSSYPGEGERWEANDSSRWSRSYVAWLPEHNYQIKKIFESKGSSRLSAMYMEVRNKCERPSWIGEEAWNELVIEWQKPEYKVLSRQNKKNRASAKGGSVHTGGSITFTEHTLRMGKFQTKLNQESEGADTDGSGTQMVDPATRLNLWATSAGGKIEDVSMVLEIGPRIIDQLATLEERAKTAEDEVRKTREELRQAEINRKNEAQQSEERAAEFQRQLIALTKNVAAMQASAEASRRRRRHPDYDEDESEDGSEDGSEDGSEDGSEMGPTVSVMMTTGKIDI 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02397 602 MobiDBLite consensus disorder prediction 567 582 - -
Tsu08g02397 602 CDD SGNH_plant_lipase_like 38 317 IPR035669 -
Tsu08g02397 602 PANTHER - 19 350 - -
Tsu08g02397 602 Coils Coil 492 544 - -
Tsu08g02397 602 MobiDBLite consensus disorder prediction 550 602 - -
Tsu08g02397 602 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 19 350 - -
Tsu08g02397 602 Gene3D SGNH hydrolase 31 346 IPR036514 -
Tsu08g02397 602 Pfam Plant transposase (Ptta/En/Spm family) 385 436 IPR004252 -
Tsu08g02397 602 Pfam GDSL-like Lipase/Acylhydrolase 40 346 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02397 Tsu-Chr8 35229311 35255407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02397 39 317 Acyl Lipid Metabolism Gene Families AT4G10950 31.579 2.99e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02397 - - aip:107630589 456.062