Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02384 ATGAGAAATTCATCTATTGAGAAGTGCACCACCAGCAAAAATTTCGAAACCGAATCGGAAAAACATGTTTACGGCGCAATGTTGCCGGTTTTCCTCAACGACCTTCGTAGTAATCACCACAACGAGCTCGTTGAGATAACGTTAGAGCTCGAAGAAAACGCGGTCGTGCTACGAGACATAGCTTCCGCTCCAAACGCATCTCCGTCTTCTAGTCATGCTACCGGAGATGAAGCTACGGTCGGTCTCTCGAGGAGTCTTTCAATTGCGTCGAAGATACGGAAGAAGTTTCCGTGGCTGAGGTCGTTGTCTTTGCAAAGATCAACCTCGTCCTCGGAGAGTGTAACTACCGCTCTGGAGGATCCGATGATGGCGAGAAATGCAAGAAGAATGCGAGCGGAACTTGTACGGACGAGATCGAGTGCTCAAAGAGGTTTGAAAGGTTTAAGATTTATTAGTAAGTCTGGTGAAGCTCTTGAGGAGATATGGAGAAAAGTTGAAAAGAGGTTTGGATTTCTTGCTAAAGATGGTTTGCTAGACAGAGAAGAATTTGGTGAATGCATTGGGATGGAAGATTCAAAGGAATTTGCGGTTGGTATATTTGATGCATTAGCTagaagaaaggaaagaaaagaagtGAGCAAGATAACGAAAGAAGAACTGCGTCAGTTTTGGTTGCAAATTTCAAATCAGAGTTTTGATGCAAGACTTCAAATTTTCTTTGACATGGCAGACAGTAATGAAGATGGAAGGATTACTAGGGAAGAAGTACAAGAGCTTATAATGCTAAGTGCTTCTGCAAACAACTTATCGAAGCTAAAAGAACAAGCTGAAGGGTACGCTGCATTAATAATGGAAGAATTGGATCCTGAAAACCTTGGTTATATCGAGCTGTGGCAGCTAGAAATGTTACTACTAGAAAAAGACAGATACATGACCTACAGTAGACAACTCAGCAGTGCAAGTGTAAACTGGAGTCAAAATATGACAACTTCGAcacccaaaaataaaatccaaaaaatcctAAAAACACTTCAATGTCTTGCATTAGAATATTGGAGAAGGGGTTGGATTTTGTTATTGTGGTTTTTTACCATTGCTTGTCTTTTTGCCTGGAAATTTTACCAATACAAAAACAGAACAAGTTTTGAAGTCATGAGTTATTGTTTACCAGTAGCTAAAGGTGCTGCAGAGACACTTAAGTTCAACATGGCTCTTATTCTTTTGCCGGTTTGTCGAAATACATTGACTTGGCTTCGTTCTACGAAAGTTAGGAAATTTGTTCCCTTTGATGACAATATTAATTTCCATAAGATGATTGCATTTGGCATACTTGTTGGAATAGTTATCCATGCAGGAAATCATCTCGCATGCGATTTCCCTCTTCTCGTAAACTCATCACCCGAAAAGTTCTCACTGATATCTTCTGATTTCAATAACGAAAAACCCACATACAAATCACTTTTGATTAGCATTGAAGGAATAACAGGAATAACAATGGTTACTTTGATGATAATATCATTTACTCTAGCAACTAGCCAGTTTCGAAGAAATGCAGTAAATCTTCCTTCACCAATCAACCGATTAACAGGCTTTAATGCATTTTGGTACTCACACCATCTTCTTGGTATAGTCTACGTTCTTCTGTTCATCCATGGATCGTTCCTGAATTTGACGCATAAGTGGTACCAGAAAACAACATGGATGTATATTTCTGTTCCGTTGTTGCTTTACATCGCAGAGCGTACTCTAAGAACTCGTAGATCGCAACATTATGCAGTAAAAGTCCTAAAgGTTTCAGTGCTACCAGGAAATGTCTTTAGCTTAATCTTGTCAAAGCCTAATGGATTCAAGTACAAAAGCGGCCAATACATATTTTTACAATGTCCGAAAATCTCTCCCTTTGAGTGGCATCCATTCTCCATTACATCAGCACCAGGAGATGAGTACCTAAGTGTTCACATTCGAACAGTAGGAGACTGGACGCAAGAGCTTAAGCATCTTTTCACTGAAGACGACCAACTGCCTCCTGTTACCGGTCAAGCAACATTCCGCGAACTAATTCAAATGGATCAAAGAGGACAACCGAAGCTGCTCGTAGATGGCCCATACGGAGCTCCAGCACAAGATTACCAAAATTTCGATGTATTGCTGCTCATAGGATTAGGAATTGGAGCAACTCCCTTCATTAGTATTCTTCGAGATATTTTGAGTGACACACGAACAATTGACGAACAAACGGACTCCAACACAGAAACAACAAAATCAGATGAAAGCTTCAACAGTTTCACTTCTTCAAATGTAACGCCGGGAAGAAATAAGAGATCACAAAGGATTACAAATGCTTACTTCTATTGGGTTACTAGAGAACCTGGATCTTTTGAATGGTTTAAAGGAGTAATGGATGAAGTTGCAGAAATGGACCACAAAGGACTAATTGAACTACACAACTATCTTACAAGTGTGTATGAAGAAGGTGATGCAAGATCAACCTTGATCACAATGATTCAAGCACTAAACCATGCCAAACATGGTGTTGACATTCTATCAGGCACTAGAGTGAGGACACACTTTGCTAGGCCTGATTGGAAAGAAGTTTTCACAAAGATAGCTTCAAAACATCCGAATTCTACTGTAGGTGTGTTCTATTGTGGGATGCCAGTGCTAGCAAAGGAGCTAAAGAAACTGTCACTTGAGCTCAGTCATAAGACAACCACACGCTTTGAATTTCATAAGGAGTTGGGGTTGCTCCGCCGTTTTCCGTTCGGTGAGCCTCCTTTTGCGTTCTTGAATCTGTTCATTTCAGTGTTGGTTGTGATATTTAGCGATCAATCACCATATGAGAAAGATAGAATGGAAAATATCATACAACTTTGA 2874 0.3956 MRNSSIEKCTTSKNFETESEKHVYGAMLPVFLNDLRSNHHNELVEITLELEENAVVLRDIASAPNASPSSSHATGDEATVGLSRSLSIASKIRKKFPWLRSLSLQRSTSSSESVTTALEDPMMARNARRMRAELVRTRSSAQRGLKGLRFISKSGEALEEIWRKVEKRFGFLAKDGLLDREEFGECIGMEDSKEFAVGIFDALARRKERKEVSKITKEELRQFWLQISNQSFDARLQIFFDMADSNEDGRITREEVQELIMLSASANNLSKLKEQAEGYAALIMEELDPENLGYIELWQLEMLLLEKDRYMTYSRQLSSASVNWSQNMTTSTPKNKIQKILKTLQCLALEYWRRGWILLLWFFTIACLFAWKFYQYKNRTSFEVMSYCLPVAKGAAETLKFNMALILLPVCRNTLTWLRSTKVRKFVPFDDNINFHKMIAFGILVGIVIHAGNHLACDFPLLVNSSPEKFSLISSDFNNEKPTYKSLLISIEGITGITMVTLMIISFTLATSQFRRNAVNLPSPINRLTGFNAFWYSHHLLGIVYVLLFIHGSFLNLTHKWYQKTTWMYISVPLLLYIAERTLRTRRSQHYAVKVLKVSVLPGNVFSLILSKPNGFKYKSGQYIFLQCPKISPFEWHPFSITSAPGDEYLSVHIRTVGDWTQELKHLFTEDDQLPPVTGQATFRELIQMDQRGQPKLLVDGPYGAPAQDYQNFDVLLLIGLGIGATPFISILRDILSDTRTIDEQTDSNTETTKSDESFNSFTSSNVTPGRNKRSQRITNAYFYWVTREPGSFEWFKGVMDEVAEMDHKGLIELHNYLTSVYEEGDARSTLITMIQALNHAKHGVDILSGTRVRTHFARPDWKEVFTKIASKHPNSTVGVFYCGMPVLAKELKKLSLELSHKTTTRFEFHKELGLLRRFPFGEPPFAFLNLFISVLVVIFSDQSPYEKDRMENIIQL 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02384 957 ProSitePatterns EF-hand calcium-binding domain. 244 256 IPR018247 -
Tsu08g02384 957 SUPERFAMILY EF-hand 159 312 IPR011992 -
Tsu08g02384 957 Pfam Ferric reductase like transmembrane component 394 548 IPR013130 -
Tsu08g02384 957 MobiDBLite consensus disorder prediction 744 772 - -
Tsu08g02384 957 Pfam EF hand 237 259 IPR002048 GO:0005509
Tsu08g02384 957 ProSiteProfiles EF-hand calcium-binding domain profile. 231 266 IPR002048 GO:0005509
Tsu08g02384 957 PANTHER NADPH OXIDASE 33 912 - -
Tsu08g02384 957 Pfam Respiratory burst NADPH oxidase 134 234 IPR013623 GO:0004601|GO:0050664
Tsu08g02384 957 PANTHER RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN E 33 912 - -
Tsu08g02384 957 CDD EFh 214 261 IPR002048 GO:0005509
Tsu08g02384 957 CDD NOX_Duox_like_FAD_NADP 595 866 - -
Tsu08g02384 957 Pfam FAD-binding domain 591 706 IPR013112 GO:0016491
Tsu08g02384 957 Gene3D - 134 252 - -
Tsu08g02384 957 SUPERFAMILY Riboflavin synthase domain-like 590 706 IPR017938 -
Tsu08g02384 957 Gene3D Translation factors 577 675 - -
Tsu08g02384 957 SFLD NADPH oxidase subgroup (NOX) 5 912 - -
Tsu08g02384 957 Gene3D - 704 914 IPR039261 -
Tsu08g02384 957 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 588 709 IPR017927 GO:0016491
Tsu08g02384 957 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 712 902 IPR039261 -
Tsu08g02384 957 PRINTS Cytochrome B-245 heavy chain signature 718 735 IPR000778 GO:0016020|GO:0016491
Tsu08g02384 957 PRINTS Cytochrome B-245 heavy chain signature 695 708 IPR000778 GO:0016020|GO:0016491
Tsu08g02384 957 PRINTS Cytochrome B-245 heavy chain signature 494 517 IPR000778 GO:0016020|GO:0016491
Tsu08g02384 957 MobiDBLite consensus disorder prediction 752 772 - -
Tsu08g02384 957 Pfam Ferric reductase NAD binding domain 713 896 IPR013121 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02384 Tsu-Chr8 34952971 34965648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02384 25 912 Miscellaneous Gene Families AT1G19230 62.311 0.0 1144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02384 K13447 - gmx:100805697 1480.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g02384 08 34952971 34965648 Tsu08g02384 08 34952971 34965648 ECH