Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g02335 ATGGCTTctctaaaatattttgtttaccttactttcttcctttgttttattttcttgaatagTAATGCAGTTGAAGTAACTCATGATGGAAGAGCCATCAAAATTGATGGCAAAAGAAGAGTTCTTATTTCTGGATCAATTCATTATCCTAGAAGCACACCTCAGatgTGGCctgatttgattaaaaaagcTAAAGAAGGAGGATTGGATGCAATTGAAACATATGTTTTTTGGAATGCACATGAACCAATTCGTCGTGAGTATGATTTTAGTGGCAATAATGATCTCATTAGATTTCTCAAAACTATTCAAGATGAAGGACTTTATGCTGTGCTTCGAATTGGCCCTTATGTTTGTGCTGAATGGAATTATGGagGAATTCCTGTCTGGGTTCACAATCTTCCCGGCGTCGAGATTAGGACGGCCAATAAAGTCTATAtgAATGAAATGCAAAATTTCACTACTTTGATTGTGAATATGGTACAAAAAGAGAAACTTTTTGCTTCACAAGGTGGTCCCATAATTCTATCTCagATTGAGAATGAGTATGGAAATGTTATGTCTGTTTATGGGGATGATGGTAAAGCTTATATAGATTGGTGTGCTAAGATGGCTGATTCATTCAACATTGGTGTCCCATGGATTATGTGCCAACAACCTGATGCTCCTCAACCAATGATCAATACTTGTAATGGATGGTATTGTCACGACTTTGAGCCCAATAATCCTAATAGTCCCAAGATGTGGACTGAAAATTGGGTTGGCTGgTTCAAGAACTGGGGTGGCAAAGATCCACACAGAACTGCAGAAGATGTTGCCTATTCAGTGGCAAGGTTTTTTGAAACTGGAGGCACATTCCAAAACTACTATATGtaTCATGGTGGGACTAACTTTGGTAGAACAGCTGGTGGACCATACATTACCACATCTTATGATTATGATGCCCCTCTTGATGAATATGGAAACATTGCACAACCAAAATGGGGTCACCTAAAAGAACTTCACTTGGTTTTGAAGTCAATGGAGAATAGTCTTACCAATGGAAACGTATCTAAAGTTGATTTAGGAAACTATGTGAAGGCTACTGTTTATGCAACAAATGATTCATCAAGTTGCTTCTTGACCAACACCAACACCACCACAGATGCCACAGTAACATTTAGAGGAAATACATATAATGTTCCTGCATGGTCTGTCAGTCTTCTTCCTAACTGTCAAACTGAAGAGTATAACACTGCCAAGATAAATGTTCAAACATCCATCATggtaaagagaaaaaacaaagctGAAGATGAACCAGAGGGTTTGAAGTGGGTATGGAGAGCAGAGAATGTTCATAGTGCTCTGTTGGGGAAATCAAATGTCTttcaaaatacaattgttgatcAAAAAAGTGCTGCTAATGATTCCAGTGACTACCTTTGGTACATGACAAGGCTTAATATTGATCATAAGGATCCAGTTTGGACAGAAAATATGACTCTGAGGATTAATGGCACTGGCCATGTAATTCATGTGTTTGTCAATGGAGAACATACTGGTTCCCATTGGGCTACATATGGAATTCACAATGATCAATTTGAGACTAACATAAAGTTGAGACATGGCAGGAATGATATTAGTCTTCTTAGTGTTACTGTAGGACTTCAGaattatgGGAAAGAGTTTGATAAATGGCAAGATGGACTTGTTAGTCCTATTGAGATTATTGGTAAAAAGGGTGATGAAACCATCATTAAAGATCTATCATCACACAAGTGGACATACAAAGTAGGGTTACATGGTTGGGAGAACAAATTCTTTAGTCAAGATTCACTCTTTGCTTCTTCTTCCAAATGGCAATCTCATCATCTACCTATTAACAGGATGTTCACTTGGTACAAGACAACTTTCCAAGCTCCTCTAGGATCAGACCCTATTGTGGTCGATTTGCAAGGTATGGGAAAAGGTTATGCTTGGGTTAATGGTCATTCTCTTGGTCGCATTTGGCCTAGTTATAATGCAGATGAGAATGGTTGTAGTGATGATCCTTGTGACTATCGTGGTGAATATACTGACACAAAATGTGTTACCAATTGTGGCAAACCCTCACAAAGATGGTACCATGTTCCTCGTGACTTTATTGAAGATGGTGTGAACACATTAGTTTTGTTTGAGGAAATTGGTGGTAATCCATCACAAGTAAATTTCCAAACAGTTATTGTTGGAACTGCTTGTGGAAATGCTTATGAGAATAAGACTTTGGAATTGTCCTGCCATGGTCGTTCTATCTTGGATATAAAGTTTGCAAGTTTTGGTAATCCAaaaggtgtatgtggaacattCACTAAGGGCAATTGTGAAAGTATTAATGATTCTGTGTCCTTTGTGAAAAGTGAATGTGTTGGCAAGGATTCATGCTCAATTGATGTTTCAGAGAAAACATTTGGGCCAACAAACTGTGGAAATTTGGTGAAGAGGCTAGCTGTTGAGGCTATTTGTGAGGATTTATAG 2493 0.3622 MASLKYFVYLTFFLCFIFLNSNAVEVTHDGRAIKIDGKRRVLISGSIHYPRSTPQMWPDLIKKAKEGGLDAIETYVFWNAHEPIRREYDFSGNNDLIRFLKTIQDEGLYAVLRIGPYVCAEWNYGGIPVWVHNLPGVEIRTANKVYMNEMQNFTTLIVNMVQKEKLFASQGGPIILSQIENEYGNVMSVYGDDGKAYIDWCAKMADSFNIGVPWIMCQQPDAPQPMINTCNGWYCHDFEPNNPNSPKMWTENWVGWFKNWGGKDPHRTAEDVAYSVARFFETGGTFQNYYMYHGGTNFGRTAGGPYITTSYDYDAPLDEYGNIAQPKWGHLKELHLVLKSMENSLTNGNVSKVDLGNYVKATVYATNDSSSCFLTNTNTTTDATVTFRGNTYNVPAWSVSLLPNCQTEEYNTAKINVQTSIMVKRKNKAEDEPEGLKWVWRAENVHSALLGKSNVFQNTIVDQKSAANDSSDYLWYMTRLNIDHKDPVWTENMTLRINGTGHVIHVFVNGEHTGSHWATYGIHNDQFETNIKLRHGRNDISLLSVTVGLQNYGKEFDKWQDGLVSPIEIIGKKGDETIIKDLSSHKWTYKVGLHGWENKFFSQDSLFASSSKWQSHHLPINRMFTWYKTTFQAPLGSDPIVVDLQGMGKGYAWVNGHSLGRIWPSYNADENGCSDDPCDYRGEYTDTKCVTNCGKPSQRWYHVPRDFIEDGVNTLVLFEEIGGNPSQVNFQTVIVGTACGNAYENKTLELSCHGRSILDIKFASFGNPKGVCGTFTKGNCESINDSVSFVKSECVGKDSCSIDVSEKTFGPTNCGNLVKRLAVEAICEDL 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g02335 830 SUPERFAMILY (Trans)glycosidases 24 341 IPR017853 -
Tsu08g02335 830 SUPERFAMILY Galactose-binding domain-like 585 747 IPR008979 -
Tsu08g02335 830 Gene3D - 587 674 - -
Tsu08g02335 830 Pfam Glycosyl hydrolases family 35 34 335 IPR031330 -
Tsu08g02335 830 PANTHER BETA-GALACTOSIDASE 7 19 817 - -
Tsu08g02335 830 Gene3D - 290 428 - -
Tsu08g02335 830 PANTHER BETA-GALACTOSIDASE RELATED 19 817 IPR001944 GO:0004553|GO:0005975
Tsu08g02335 830 Pfam Beta-sandwich domain in beta galactosidase 345 415 IPR041392 -
Tsu08g02335 830 Gene3D Glycosidases 19 288 - -
Tsu08g02335 830 Pfam Galactose binding lectin domain 750 827 IPR000922 GO:0030246
Tsu08g02335 830 ProSiteProfiles SUEL-type lectin domain profile. 742 828 IPR000922 GO:0030246
Tsu08g02335 830 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Tsu08g02335 830 Gene3D - 734 830 IPR043159 -
Tsu08g02335 830 SUPERFAMILY Galactose-binding domain-like 399 557 IPR008979 -
Tsu08g02335 830 Gene3D - 446 586 - -
Tsu08g02335 830 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Tsu08g02335 830 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Tsu08g02335 830 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Tsu08g02335 830 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Tsu08g02335 830 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Tsu08g02335 830 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Tsu08g02335 830 PRINTS Glycosyl hydrolase family 35 signature 649 665 IPR001944 GO:0004553|GO:0005975
Tsu08g02335 830 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Tsu08g02335 830 PRINTS Glycosyl hydrolase family 35 signature 622 636 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g02335 Tsu-Chr8 33450871 33457031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g02335 7 827 Glycoside Hydrolase AT1G31740 62.788 0.0 1094
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g02335 - - gmx:100789201 1406.35